STRINGSTRING
C3XTW9_BRAFL C3XTW9_BRAFL C3XPG8_BRAFL C3XPG8_BRAFL C3XQC7_BRAFL C3XQC7_BRAFL C3XUJ5_BRAFL C3XUJ5_BRAFL C3XVA8_BRAFL C3XVA8_BRAFL C3XZD0_BRAFL C3XZD0_BRAFL C3Y089_BRAFL C3Y089_BRAFL C3Y202_BRAFL C3Y202_BRAFL C3Y3L8_BRAFL C3Y3L8_BRAFL C3Y5K6_BRAFL C3Y5K6_BRAFL C3Y6K1_BRAFL C3Y6K1_BRAFL C3Y7R6_BRAFL C3Y7R6_BRAFL C3Y9F3_BRAFL C3Y9F3_BRAFL C3Y9G3_BRAFL C3Y9G3_BRAFL C3YBI7_BRAFL C3YBI7_BRAFL C3YD16_BRAFL C3YD16_BRAFL C3YEL6_BRAFL C3YEL6_BRAFL C3YEL7_BRAFL C3YEL7_BRAFL C3YGI0_BRAFL C3YGI0_BRAFL C3YHN8_BRAFL C3YHN8_BRAFL C3YHR6_BRAFL C3YHR6_BRAFL C3YI96_BRAFL C3YI96_BRAFL C3YI97_BRAFL C3YI97_BRAFL C3YIS5_BRAFL C3YIS5_BRAFL C3YJ28_BRAFL C3YJ28_BRAFL C3YJC5_BRAFL C3YJC5_BRAFL C3YJD4_BRAFL C3YJD4_BRAFL C3YKX2_BRAFL C3YKX2_BRAFL C3YL74_BRAFL C3YL74_BRAFL C3YPW1_BRAFL C3YPW1_BRAFL C3YR59_BRAFL C3YR59_BRAFL C3YTH4_BRAFL C3YTH4_BRAFL C3YTN4_BRAFL C3YTN4_BRAFL C3YWA5_BRAFL C3YWA5_BRAFL C3YXI0_BRAFL C3YXI0_BRAFL C3YZ01_BRAFL C3YZ01_BRAFL C3Z3L2_BRAFL C3Z3L2_BRAFL C3Z4J5_BRAFL C3Z4J5_BRAFL C3Z5X3_BRAFL C3Z5X3_BRAFL C3Z629_BRAFL C3Z629_BRAFL C3Z7P4_BRAFL C3Z7P4_BRAFL C3ZD95_BRAFL C3ZD95_BRAFL C3ZEE6_BRAFL C3ZEE6_BRAFL C3ZF60_BRAFL C3ZF60_BRAFL C3ZHE6_BRAFL C3ZHE6_BRAFL C3ZHN0_BRAFL C3ZHN0_BRAFL C3ZHN8_BRAFL C3ZHN8_BRAFL C3ZHV8_BRAFL C3ZHV8_BRAFL C3ZHV9_BRAFL C3ZHV9_BRAFL C3ZJN9_BRAFL C3ZJN9_BRAFL C3ZLP5_BRAFL C3ZLP5_BRAFL C3ZN04_BRAFL C3ZN04_BRAFL C3ZQ21_BRAFL C3ZQ21_BRAFL C3ZRF2_BRAFL C3ZRF2_BRAFL C3ZV97_BRAFL C3ZV97_BRAFL C3ZVQ8_BRAFL C3ZVQ8_BRAFL C3ZXE4_BRAFL C3ZXE4_BRAFL C3ZZH4_BRAFL C3ZZH4_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XTW9_BRAFLUncharacterized protein. (64 aa)
C3XPG8_BRAFLDNA ligase. (928 aa)
C3XQC7_BRAFLPOLXc domain-containing protein. (186 aa)
C3XUJ5_BRAFLApaG domain-containing protein. (321 aa)
C3XVA8_BRAFLUncharacterized protein. (115 aa)
C3XZD0_BRAFLUncharacterized protein. (427 aa)
C3Y089_BRAFLWD_REPEATS_REGION domain-containing protein. (626 aa)
C3Y202_BRAFLPAF domain-containing protein. (105 aa)
C3Y3L8_BRAFLPOLAc domain-containing protein. (196 aa)
C3Y5K6_BRAFLDNA polymerase. (1286 aa)
C3Y6K1_BRAFLUncharacterized protein. (1191 aa)
C3Y7R6_BRAFLPUA domain-containing protein. (470 aa)
C3Y9F3_BRAFLUncharacterized protein. (449 aa)
C3Y9G3_BRAFLUncharacterized protein. (828 aa)
C3YBI7_BRAFLUmuC domain-containing protein. (493 aa)
C3YD16_BRAFLTelo_bind domain-containing protein. (396 aa)
C3YEL6_BRAFLDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (579 aa)
C3YEL7_BRAFLDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (540 aa)
C3YGI0_BRAFLAAA domain-containing protein. (449 aa)
C3YHN8_BRAFLUncharacterized protein. (831 aa)
C3YHR6_BRAFLUncharacterized protein. (764 aa)
C3YI96_BRAFLDNA polymerase. (813 aa)
C3YI97_BRAFLDNA_pol_B_exo1 domain-containing protein. (222 aa)
C3YIS5_BRAFLBRCT domain-containing protein; Belongs to the DNA polymerase type-X family. (430 aa)
C3YJ28_BRAFLDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (510 aa)
C3YJC5_BRAFLThymidine kinase. (196 aa)
C3YJD4_BRAFLHGTP_anticodon domain-containing protein. (212 aa)
C3YKX2_BRAFLDeacetylase sirtuin-type domain-containing protein. (312 aa)
C3YL74_BRAFLUncharacterized protein. (2215 aa)
C3YPW1_BRAFLPOLAc domain-containing protein. (1237 aa)
C3YR59_BRAFLUmuC domain-containing protein. (397 aa)
C3YTH4_BRAFLUncharacterized protein; Belongs to the AAA ATPase family. (718 aa)
C3YTN4_BRAFLUncharacterized protein. (349 aa)
C3YWA5_BRAFLAAA_23 domain-containing protein. (187 aa)
C3YXI0_BRAFLDNApol_Exo domain-containing protein. (644 aa)
C3YZ01_BRAFLDNA ligase. (793 aa)
C3Z3L2_BRAFLUmuC domain-containing protein. (354 aa)
C3Z4J5_BRAFLUncharacterized protein. (2574 aa)
C3Z5X3_BRAFLH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (216 aa)
C3Z629_BRAFLProhibitin. (276 aa)
C3Z7P4_BRAFLDNA ligase. (952 aa)
C3ZD95_BRAFLUncharacterized protein. (499 aa)
C3ZEE6_BRAFLDNA polymerase. (1526 aa)
C3ZF60_BRAFLWD_REPEATS_REGION domain-containing protein. (434 aa)
C3ZHE6_BRAFLUncharacterized protein. (906 aa)
C3ZHN0_BRAFLCS domain-containing protein. (178 aa)
C3ZHN8_BRAFLG-patch domain-containing protein. (364 aa)
C3ZHV8_BRAFLReplication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (265 aa)
C3ZHV9_BRAFLUncharacterized protein. (256 aa)
C3ZJN9_BRAFLUncharacterized protein. (1786 aa)
C3ZLP5_BRAFLdNK domain-containing protein. (249 aa)
C3ZN04_BRAFLDNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (541 aa)
C3ZQ21_BRAFLHTH myb-type domain-containing protein. (55 aa)
C3ZRF2_BRAFLProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
C3ZV97_BRAFLEndo/exonuclease/phosphatase domain-containing protein. (559 aa)
C3ZVQ8_BRAFLUBZ_FAAP20 domain-containing protein. (583 aa)
C3ZXE4_BRAFLUmuC domain-containing protein. (488 aa)
C3ZZH4_BRAFLUncharacterized protein. (541 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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