24 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZEC4_BRAFL	Uncharacterized protein. (457 aa)
	C3Y0H1_BRAFL	Helicase ATP-binding domain-containing protein. (763 aa)
	C3Y1W8_BRAFL	Uncharacterized protein. (720 aa)
	C3Y204_BRAFL	Uncharacterized protein. (596 aa)
	C3Y205_BRAFL	Uncharacterized protein. (454 aa)
	C3Y559_BRAFL	ETS domain-containing protein. (87 aa)
	C3Y679_BRAFL	Uncharacterized protein. (925 aa)
	C3Y6U5_BRAFL	Uncharacterized protein. (360 aa)
	C3Y7W6_BRAFL	Uncharacterized protein. (219 aa)
	C3Y9W2_BRAFL	ANK_REP_REGION domain-containing protein. (216 aa)
	C3YHH3_BRAFL	Uncharacterized protein. (283 aa)
	C3YPM1_BRAFL	RBR-type E3 ubiquitin transferase. (389 aa)
	C3YT07_BRAFL	Uncharacterized protein. (302 aa)
	C3YT44_BRAFL	Uncharacterized protein. (373 aa)
	C3YTI8_BRAFL	Uncharacterized protein. (247 aa)
	C3YVP0_BRAFL	ZNRF_3_ecto domain-containing protein. (114 aa)
	C3YVP1_BRAFL	Uncharacterized protein. (57 aa)
	C3YY73_BRAFL	Uncharacterized protein. (66 aa)
	C3YZ01_BRAFL	DNA ligase. (793 aa)
	C3ZB62_BRAFL	B box-type domain-containing protein. (603 aa)
	C3ZV81_BRAFL	CRAL-TRIO domain-containing protein. (1389 aa)
	C3ZV77_BRAFL	Ras-GAP domain-containing protein. (1311 aa)
	C3ZSM7_BRAFL	Ku domain-containing protein. (716 aa)
	C3XW39_BRAFL	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (163 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y0H1_BRAFL	C3YZ01_BRAFL	C3Y0H1	C3YZ01	Helicase ATP-binding domain-containing protein.	DNA ligase.	0.507
C3Y0H1_BRAFL	C3ZSM7_BRAFL	C3Y0H1	C3ZSM7	Helicase ATP-binding domain-containing protein.	Ku domain-containing protein.	0.528
C3Y204_BRAFL	C3Y205_BRAFL	C3Y204	C3Y205	Uncharacterized protein.	Uncharacterized protein.	0.942
C3Y205_BRAFL	C3Y204_BRAFL	C3Y205	C3Y204	Uncharacterized protein.	Uncharacterized protein.	0.942
C3YT07_BRAFL	C3YTI8_BRAFL	C3YT07	C3YTI8	Uncharacterized protein.	Uncharacterized protein.	0.543
C3YTI8_BRAFL	C3YT07_BRAFL	C3YTI8	C3YT07	Uncharacterized protein.	Uncharacterized protein.	0.543
C3YZ01_BRAFL	C3Y0H1_BRAFL	C3YZ01	C3Y0H1	DNA ligase.	Helicase ATP-binding domain-containing protein.	0.507
C3YZ01_BRAFL	C3ZSM7_BRAFL	C3YZ01	C3ZSM7	DNA ligase.	Ku domain-containing protein.	0.989
C3ZSM7_BRAFL	C3Y0H1_BRAFL	C3ZSM7	C3Y0H1	Ku domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.528
C3ZSM7_BRAFL	C3YZ01_BRAFL	C3ZSM7	C3YZ01	Ku domain-containing protein.	DNA ligase.	0.989
C3ZV77_BRAFL	C3ZV81_BRAFL	C3ZV77	C3ZV81	Ras-GAP domain-containing protein.	CRAL-TRIO domain-containing protein.	0.951
C3ZV81_BRAFL	C3ZV77_BRAFL	C3ZV81	C3ZV77	CRAL-TRIO domain-containing protein.	Ras-GAP domain-containing protein.	0.951