STRINGSTRING
C3XPP3_BRAFL C3XPP3_BRAFL C3XRL2_BRAFL C3XRL2_BRAFL C3XRL4_BRAFL C3XRL4_BRAFL C3XRZ9_BRAFL C3XRZ9_BRAFL C3XTJ3_BRAFL C3XTJ3_BRAFL C3XU44_BRAFL C3XU44_BRAFL C3XU45_BRAFL C3XU45_BRAFL C3XU46_BRAFL C3XU46_BRAFL C3XU65_BRAFL C3XU65_BRAFL C3XVR6_BRAFL C3XVR6_BRAFL Thop1.1 Thop1.1 C3XWF6_BRAFL C3XWF6_BRAFL C3XWK5_BRAFL C3XWK5_BRAFL C3XX64_BRAFL C3XX64_BRAFL C3XXR0_BRAFL C3XXR0_BRAFL C3XZM7_BRAFL C3XZM7_BRAFL C3Y0H1_BRAFL C3Y0H1_BRAFL C3Y0I0_BRAFL C3Y0I0_BRAFL C3Y1W9_BRAFL C3Y1W9_BRAFL C3Y201_BRAFL C3Y201_BRAFL C3Y2E5_BRAFL C3Y2E5_BRAFL C3Y2V8_BRAFL C3Y2V8_BRAFL C3Y3A3_BRAFL C3Y3A3_BRAFL C3Y411_BRAFL C3Y411_BRAFL C3Y591_BRAFL C3Y591_BRAFL C3Y605_BRAFL C3Y605_BRAFL C3Y693_BRAFL C3Y693_BRAFL C3Y6V2_BRAFL C3Y6V2_BRAFL MED8 MED8 C3YBY7_BRAFL C3YBY7_BRAFL C3YD69_BRAFL C3YD69_BRAFL C3YDG4_BRAFL C3YDG4_BRAFL C3YDQ8_BRAFL C3YDQ8_BRAFL C3YEK2_BRAFL C3YEK2_BRAFL C3YEN0_BRAFL C3YEN0_BRAFL C3YEN1_BRAFL C3YEN1_BRAFL C3YIU4_BRAFL C3YIU4_BRAFL C3YIU8_BRAFL C3YIU8_BRAFL C3YJC9_BRAFL C3YJC9_BRAFL C3YJJ8_BRAFL C3YJJ8_BRAFL C3YJL2_BRAFL C3YJL2_BRAFL C3YL42_BRAFL C3YL42_BRAFL C3YL43_BRAFL C3YL43_BRAFL C3YLC3_BRAFL C3YLC3_BRAFL C3YLI3_BRAFL C3YLI3_BRAFL C3YN18_BRAFL C3YN18_BRAFL C3YQ89_BRAFL C3YQ89_BRAFL C3YQA1_BRAFL C3YQA1_BRAFL C3YQI6_BRAFL C3YQI6_BRAFL C3YQP4_BRAFL C3YQP4_BRAFL C3YSA7_BRAFL C3YSA7_BRAFL C3YT59_BRAFL C3YT59_BRAFL C3YTK8_BRAFL C3YTK8_BRAFL C3YU08_BRAFL C3YU08_BRAFL C3YVD4_BRAFL C3YVD4_BRAFL C3YVK1_BRAFL C3YVK1_BRAFL C3YW09_BRAFL C3YW09_BRAFL C3YW57_BRAFL C3YW57_BRAFL MED18 MED18 C3YX15_BRAFL C3YX15_BRAFL C3YXH7_BRAFL C3YXH7_BRAFL C3YXI9_BRAFL C3YXI9_BRAFL MED15 MED15 C3YZL9_BRAFL C3YZL9_BRAFL C3YZU2_BRAFL C3YZU2_BRAFL C3Z1E7_BRAFL C3Z1E7_BRAFL MED17 MED17 C3Z2E0_BRAFL C3Z2E0_BRAFL MED9 MED9 C3Z4S1_BRAFL C3Z4S1_BRAFL C3Z507_BRAFL C3Z507_BRAFL C3Z508_BRAFL C3Z508_BRAFL C3Z5P5_BRAFL C3Z5P5_BRAFL C3Z5Q6_BRAFL C3Z5Q6_BRAFL C3Z744_BRAFL C3Z744_BRAFL C3Z898_BRAFL C3Z898_BRAFL C3Z8A2_BRAFL C3Z8A2_BRAFL C3Z9S8_BRAFL C3Z9S8_BRAFL C3ZBS5_BRAFL C3ZBS5_BRAFL C3ZC47_BRAFL C3ZC47_BRAFL C3ZCP1_BRAFL C3ZCP1_BRAFL C3ZCV2_BRAFL C3ZCV2_BRAFL C3ZD36_BRAFL C3ZD36_BRAFL C3ZDV4_BRAFL C3ZDV4_BRAFL C3ZDV6_BRAFL C3ZDV6_BRAFL C3ZEY7_BRAFL C3ZEY7_BRAFL C3ZF42_BRAFL C3ZF42_BRAFL C3ZFF5_BRAFL C3ZFF5_BRAFL C3ZFY4_BRAFL C3ZFY4_BRAFL C3ZI18_BRAFL C3ZI18_BRAFL C3ZLA4_BRAFL C3ZLA4_BRAFL C3ZMG1_BRAFL C3ZMG1_BRAFL C3ZPQ2_BRAFL C3ZPQ2_BRAFL C3ZPS1_BRAFL C3ZPS1_BRAFL C3ZR41_BRAFL C3ZR41_BRAFL C3ZR44_BRAFL C3ZR44_BRAFL C3ZR49_BRAFL C3ZR49_BRAFL C3ZSP0_BRAFL C3ZSP0_BRAFL C3ZSP8_BRAFL C3ZSP8_BRAFL C3ZT09_BRAFL C3ZT09_BRAFL C3ZT37_BRAFL C3ZT37_BRAFL C3ZTY0_BRAFL C3ZTY0_BRAFL C3ZVC0_BRAFL C3ZVC0_BRAFL C3ZVC1_BRAFL C3ZVC1_BRAFL C3ZZ31_BRAFL C3ZZ31_BRAFL C4A0E9_BRAFL C4A0E9_BRAFL C4A0W1_BRAFL C4A0W1_BRAFL C4A0W8_BRAFL C4A0W8_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XPP3_BRAFLTranscription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (136 aa)
C3XRL2_BRAFLUncharacterized protein. (863 aa)
C3XRL4_BRAFLNB-ARC domain-containing protein. (1342 aa)
C3XRZ9_BRAFLBHLH domain-containing protein. (115 aa)
C3XTJ3_BRAFLTFIID_20kDa domain-containing protein. (184 aa)
C3XU44_BRAFLTAF4 domain-containing protein. (195 aa)
C3XU45_BRAFLTAF4 domain-containing protein. (58 aa)
C3XU46_BRAFLTAFH domain-containing protein. (78 aa)
C3XU65_BRAFLBZIP domain-containing protein. (375 aa)
C3XVR6_BRAFLBZIP domain-containing protein. (242 aa)
Thop1.1BZIP domain-containing protein. (336 aa)
C3XWF6_BRAFLUncharacterized protein. (1410 aa)
C3XWK5_BRAFLTAFII55_N domain-containing protein. (381 aa)
C3XX64_BRAFLRFXA_RFXANK_bdg domain-containing protein. (198 aa)
C3XXR0_BRAFLMothers against decapentaplegic-like protein 1. (161 aa)
C3XZM7_BRAFLUncharacterized protein. (246 aa)
C3Y0H1_BRAFLHelicase ATP-binding domain-containing protein. (763 aa)
C3Y0I0_BRAFLUncharacterized protein. (311 aa)
C3Y1W9_BRAFLBZIP domain-containing protein. (423 aa)
C3Y201_BRAFLASCH domain-containing protein. (608 aa)
C3Y2E5_BRAFLE2F_TDP domain-containing protein. (159 aa)
C3Y2V8_BRAFLUncharacterized protein. (427 aa)
C3Y3A3_BRAFLUncharacterized protein. (2008 aa)
C3Y411_BRAFLE2F_CC-MB domain-containing protein. (284 aa)
C3Y591_BRAFLBHLH domain-containing protein. (465 aa)
C3Y605_BRAFLUncharacterized protein. (331 aa)
C3Y693_BRAFLUncharacterized protein. (551 aa)
C3Y6V2_BRAFLMothers against decapentaplegic homolog. (425 aa)
MED8Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (245 aa)
C3YBY7_BRAFLUncharacterized protein. (798 aa)
C3YD69_BRAFLUncharacterized protein. (573 aa)
C3YDG4_BRAFLMediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (136 aa)
C3YDQ8_BRAFLMothers against decapentaplegic homolog. (559 aa)
C3YEK2_BRAFLWD_REPEATS_REGION domain-containing protein. (1491 aa)
C3YEN0_BRAFLUncharacterized protein. (721 aa)
C3YEN1_BRAFLTAFH domain-containing protein. (590 aa)
C3YIU4_BRAFLBTB domain-containing protein. (171 aa)
C3YIU8_BRAFLUncharacterized protein. (848 aa)
C3YJC9_BRAFLWD_REPEATS_REGION domain-containing protein. (1342 aa)
C3YJJ8_BRAFLUncharacterized protein. (359 aa)
C3YJL2_BRAFLUncharacterized protein. (355 aa)
C3YL42_BRAFLBZIP domain-containing protein. (214 aa)
C3YL43_BRAFLUncharacterized protein. (324 aa)
C3YLC3_BRAFLUncharacterized protein. (165 aa)
C3YLI3_BRAFLPHD-type domain-containing protein. (1052 aa)
C3YN18_BRAFLGeneral transcription factor IIH subunit. (396 aa)
C3YQ89_BRAFLBZIP domain-containing protein. (135 aa)
C3YQA1_BRAFLBZIP domain-containing protein. (244 aa)
C3YQI6_BRAFLTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (534 aa)
C3YQP4_BRAFLBZIP domain-containing protein; Belongs to the bZIP family. (321 aa)
C3YSA7_BRAFLCUE domain-containing protein. (543 aa)
C3YT59_BRAFLTFIIS N-terminal domain-containing protein. (593 aa)
C3YTK8_BRAFLGeneral transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (457 aa)
C3YU08_BRAFLBZIP domain-containing protein. (652 aa)
C3YVD4_BRAFLTranscription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (298 aa)
C3YVK1_BRAFLUncharacterized protein. (230 aa)
C3YW09_BRAFLTAFII28 domain-containing protein. (106 aa)
C3YW57_BRAFLMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (504 aa)
MED18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (204 aa)
C3YX15_BRAFLPeptidase_M1 domain-containing protein. (1059 aa)
C3YXH7_BRAFLUncharacterized protein. (791 aa)
C3YXI9_BRAFLPeptidase_M1 domain-containing protein. (995 aa)
MED15Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (757 aa)
C3YZL9_BRAFLUncharacterized protein. (2098 aa)
C3YZU2_BRAFLBZIP domain-containing protein. (205 aa)
C3Z1E7_BRAFLBZIP domain-containing protein. (178 aa)
MED17Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (623 aa)
C3Z2E0_BRAFLHTH TFE/IIEalpha-type domain-containing protein. (429 aa)
MED9Mediator of RNA polymerase II transcription subunit 9; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (113 aa)
C3Z4S1_BRAFLTAF domain-containing protein. (444 aa)
C3Z507_BRAFLNuclear receptor domain-containing protein. (84 aa)
C3Z508_BRAFLUncharacterized protein. (445 aa)
C3Z5P5_BRAFLHMG box domain-containing protein. (566 aa)
C3Z5Q6_BRAFLUncharacterized protein. (71 aa)
C3Z744_BRAFLBZIP domain-containing protein. (100 aa)
C3Z898_BRAFLGeneral transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
C3Z8A2_BRAFLRB_A domain-containing protein. (305 aa)
C3Z9S8_BRAFLCBFD_NFYB_HMF domain-containing protein. (89 aa)
C3ZBS5_BRAFLE2F_TDP domain-containing protein. (327 aa)
C3ZC47_BRAFLBTP domain-containing protein. (286 aa)
C3ZCP1_BRAFLTFIIB-type domain-containing protein. (319 aa)
C3ZCV2_BRAFLUncharacterized protein. (205 aa)
C3ZD36_BRAFLUncharacterized protein. (998 aa)
C3ZDV4_BRAFLWD_REPEATS_REGION domain-containing protein. (444 aa)
C3ZDV6_BRAFLUncharacterized protein. (559 aa)
C3ZEY7_BRAFLTAF domain-containing protein. (653 aa)
C3ZF42_BRAFLMediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1424 aa)
C3ZFF5_BRAFLMothers against decapentaplegic homolog. (854 aa)
C3ZFY4_BRAFLCBFD_NFYB_HMF domain-containing protein. (173 aa)
C3ZI18_BRAFLCBFD_NFYB_HMF domain-containing protein. (415 aa)
C3ZLA4_BRAFLUncharacterized protein. (284 aa)
C3ZMG1_BRAFLE2F_TDP domain-containing protein. (280 aa)
C3ZPQ2_BRAFLUncharacterized protein. (343 aa)
C3ZPS1_BRAFLBHLH domain-containing protein. (182 aa)
C3ZR41_BRAFLFAT domain-containing protein. (3739 aa)
C3ZR44_BRAFLUncharacterized protein. (122 aa)
C3ZR49_BRAFLUncharacterized protein; Belongs to the PI3/PI4-kinase family. (457 aa)
C3ZSP0_BRAFLBZIP domain-containing protein. (404 aa)
C3ZSP8_BRAFLUncharacterized protein. (592 aa)
C3ZT09_BRAFLCYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
C3ZT37_BRAFLUncharacterized protein. (858 aa)
C3ZTY0_BRAFLUncharacterized protein. (154 aa)
C3ZVC0_BRAFLUncharacterized protein. (143 aa)
C3ZVC1_BRAFLUncharacterized protein. (271 aa)
C3ZZ31_BRAFLNuclear receptor domain-containing protein. (70 aa)
C4A0E9_BRAFLUncharacterized protein. (157 aa)
C4A0W1_BRAFLCYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
C4A0W8_BRAFLMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (504 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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