(40 nodes) Execution phase of apoptosis network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YZ38_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (809 aa)
	C3ZY28_BRAFL	CARD domain-containing protein. (105 aa)
	C3ZZD5_BRAFL	XK-related protein. (470 aa)
	C3ZZD7_BRAFL	XK-related protein. (336 aa)
	C4A013_BRAFL	XK-related protein. (336 aa)
	C4A015_BRAFL	XK-related protein. (232 aa)
	C3ZY21_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (246 aa)
	C3Z1Q3_BRAFL	Uncharacterized protein. (2249 aa)
	C3Z946_BRAFL	Uncharacterized protein. (310 aa)
	C3ZBY2_BRAFL	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family. (169 aa)
	C3ZCP2_BRAFL	Endonuclease. (246 aa)
	C3ZD61_BRAFL	XK-related protein. (308 aa)
	C3ZHD0_BRAFL	Uncharacterized protein. (237 aa)
	C3ZHD1_BRAFL	Uncharacterized protein. (344 aa)
	C3ZHD2_BRAFL	Uncharacterized protein. (205 aa)
	C3ZMY3_BRAFL	Uncharacterized protein. (516 aa)
	C3ZQU2_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (739 aa)
	C3ZRT7_BRAFL	Uncharacterized protein. (389 aa)
	C3ZRT8_BRAFL	SAP domain-containing protein. (159 aa)
	C3ZRW5_BRAFL	XK-related protein. (363 aa)
	C3ZXH2_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (340 aa)
	C3ZXH5_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (439 aa)
	C3XQE0_BRAFL	Uncharacterized protein. (361 aa)
	C3XPS9_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (309 aa)
	C3Y396_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (242 aa)
	C3Y551_BRAFL	Bromo domain-containing protein. (1500 aa)
	C3YAZ4_BRAFL	CARD domain-containing protein. (324 aa)
	C3YDD3_BRAFL	Rieske domain-containing protein. (466 aa)
	C3YEQ1_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (476 aa)
	C3YLH6_BRAFL	Uncharacterized protein. (201 aa)
	C3YM60_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (540 aa)
	C3YMA3_BRAFL	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family. (174 aa)
	C3YQQ6_BRAFL	Uncharacterized protein. (430 aa)
	C3YR00_BRAFL	CIDE-N domain-containing protein. (327 aa)
	C3YTP1_BRAFL	Uncharacterized protein. (334 aa)
	C3YVY3_BRAFL	XK-related protein. (445 aa)
	C3XZ63_BRAFL	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1760 aa)
	C3XXH6_BRAFL	XK-related protein. (272 aa)
	C3XUC4_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (399 aa)
	C3XTQ3_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (200 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XUC4_BRAFL	C3YEQ1_BRAFL	C3XUC4	C3YEQ1	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.587
C3XUC4_BRAFL	C3YR00_BRAFL	C3XUC4	C3YR00	Uncharacterized protein; Belongs to the peptidase C14A family.	CIDE-N domain-containing protein.	0.493
C3XUC4_BRAFL	C3ZQU2_BRAFL	C3XUC4	C3ZQU2	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.587
C3YEQ1_BRAFL	C3XUC4_BRAFL	C3YEQ1	C3XUC4	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.587
C3YEQ1_BRAFL	C3ZXH2_BRAFL	C3YEQ1	C3ZXH2	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.427
C3YR00_BRAFL	C3XUC4_BRAFL	C3YR00	C3XUC4	CIDE-N domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.493
C3ZQU2_BRAFL	C3XUC4_BRAFL	C3ZQU2	C3XUC4	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.587
C3ZXH2_BRAFL	C3YEQ1_BRAFL	C3ZXH2	C3YEQ1	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.427