(6 nodes) Protein localization to non-motile cilium network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZYE3_BRAFL	Uncharacterized protein. (475 aa)
	C3XZK6_BRAFL	Uncharacterized protein. (567 aa)
	C3YEG9_BRAFL	Uncharacterized protein. (425 aa)
	C3YN37_BRAFL	Uncharacterized protein. (1290 aa)
	C3YW88_BRAFL	Uncharacterized protein. (51 aa)
	C3ZDJ4_BRAFL	WD_REPEATS_REGION domain-containing protein. (771 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3YEG9_BRAFL	C3YW88_BRAFL	C3YEG9	C3YW88	Uncharacterized protein.	Uncharacterized protein.	0.424
C3YEG9_BRAFL	C3ZDJ4_BRAFL	C3YEG9	C3ZDJ4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.442
C3YN37_BRAFL	C3ZDJ4_BRAFL	C3YN37	C3ZDJ4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.922
C3YW88_BRAFL	C3YEG9_BRAFL	C3YW88	C3YEG9	Uncharacterized protein.	Uncharacterized protein.	0.424
C3YW88_BRAFL	C3ZYE3_BRAFL	C3YW88	C3ZYE3	Uncharacterized protein.	Uncharacterized protein.	0.424
C3ZDJ4_BRAFL	C3YEG9_BRAFL	C3ZDJ4	C3YEG9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.442
C3ZDJ4_BRAFL	C3YN37_BRAFL	C3ZDJ4	C3YN37	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.922
C3ZDJ4_BRAFL	C3ZYE3_BRAFL	C3ZDJ4	C3ZYE3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.442
C3ZYE3_BRAFL	C3YW88_BRAFL	C3ZYE3	C3YW88	Uncharacterized protein.	Uncharacterized protein.	0.424
C3ZYE3_BRAFL	C3ZDJ4_BRAFL	C3ZYE3	C3ZDJ4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.442