(38 nodes) Mannosylation network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y239_BRAFL	Uncharacterized protein. (511 aa)
	C3Z2W4_BRAFL	Uncharacterized protein. (454 aa)
	C3Z3T1_BRAFL	Uncharacterized protein. (645 aa)
	C3Z7H9_BRAFL	Uncharacterized protein. (554 aa)
	C3ZAH0_BRAFL	Mannosyltransferase. (483 aa)
	C3ZB71_BRAFL	Glyco_trans_2-like domain-containing protein. (694 aa)
	C3ZBF0_BRAFL	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins. (243 aa)
	C3ZC46_BRAFL	Mannosyltransferase. (480 aa)
	C3ZDD6_BRAFL	Uncharacterized protein. (438 aa)
	C3ZE38_BRAFL	TPR_REGION domain-containing protein. (955 aa)
	C3ZIX8_BRAFL	Mannosyltransferase. (549 aa)
	C3ZIY0_BRAFL	Mannosyltransferase. (188 aa)
	C3ZME4_BRAFL	Uncharacterized protein. (253 aa)
	C3ZP87_BRAFL	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family. (83 aa)
	C3ZQH2_BRAFL	Uncharacterized protein. (731 aa)
	C3ZQI3_BRAFL	PMT_4TMC domain-containing protein. (83 aa)
	C3ZQI4_BRAFL	Uncharacterized protein. (588 aa)
	C3ZUX0_BRAFL	TPR_REGION domain-containing protein. (618 aa)
	C3YA65_BRAFL	Uncharacterized protein. (381 aa)
	C3Y7I3_BRAFL	TPR_REGION domain-containing protein. (827 aa)
	C3Y764_BRAFL	Uncharacterized protein. (360 aa)
	C3Y2S8_BRAFL	Uncharacterized protein. (716 aa)
	C3Y2E3_BRAFL	TPR_REGION domain-containing protein. (816 aa)
	C3Z1Z4_BRAFL	Uncharacterized protein. (677 aa)
	C3Y157_BRAFL	Uncharacterized protein. (738 aa)
	C3XX45_BRAFL	Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family. (506 aa)
	C3XW98_BRAFL	Uncharacterized protein. (427 aa)
	C3XU10_BRAFL	Fibronectin type-III domain-containing protein. (590 aa)
	C3XTG5_BRAFL	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. (492 aa)
	C3YC52_BRAFL	Uncharacterized protein. (287 aa)
	C3YJY6_BRAFL	Mannosyltransferase. (582 aa)
	C3YLW3_BRAFL	Uncharacterized protein. (466 aa)
	C3YMW4_BRAFL	Uncharacterized protein. (1277 aa)
	C3YQ48_BRAFL	Mannosyltransferase. (322 aa)
	C3YRH7_BRAFL	Uncharacterized protein. (403 aa)
	C3YT93_BRAFL	Uncharacterized protein. (486 aa)
	C3YXC5_BRAFL	Uncharacterized protein. (251 aa)
	C3YXT1_BRAFL	GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly. (378 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XTG5_BRAFL	C3Y764_BRAFL	C3XTG5	C3Y764	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	Uncharacterized protein.	0.540
C3XTG5_BRAFL	C3YJY6_BRAFL	C3XTG5	C3YJY6	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	Mannosyltransferase.	0.509
C3XTG5_BRAFL	C3YMW4_BRAFL	C3XTG5	C3YMW4	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	Uncharacterized protein.	0.574
C3XTG5_BRAFL	C3YQ48_BRAFL	C3XTG5	C3YQ48	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	Mannosyltransferase.	0.751
C3XTG5_BRAFL	C3YXT1_BRAFL	C3XTG5	C3YXT1	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.	0.754
C3XTG5_BRAFL	C3ZAH0_BRAFL	C3XTG5	C3ZAH0	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	Mannosyltransferase.	0.538
C3XTG5_BRAFL	C3ZBF0_BRAFL	C3XTG5	C3ZBF0	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.867
C3XTG5_BRAFL	C3ZC46_BRAFL	C3XTG5	C3ZC46	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	Mannosyltransferase.	0.509
C3XTG5_BRAFL	C3ZP87_BRAFL	C3XTG5	C3ZP87	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.902
C3XU10_BRAFL	C3Y239_BRAFL	C3XU10	C3Y239	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.643
C3XU10_BRAFL	C3Y2S8_BRAFL	C3XU10	C3Y2S8	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.707
C3XU10_BRAFL	C3YA65_BRAFL	C3XU10	C3YA65	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.622
C3XU10_BRAFL	C3YLW3_BRAFL	C3XU10	C3YLW3	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.646
C3XU10_BRAFL	C3Z1Z4_BRAFL	C3XU10	C3Z1Z4	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.442
C3XU10_BRAFL	C3Z2W4_BRAFL	C3XU10	C3Z2W4	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.640
C3XU10_BRAFL	C3Z7H9_BRAFL	C3XU10	C3Z7H9	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.454
C3XU10_BRAFL	C3ZBF0_BRAFL	C3XU10	C3ZBF0	Fibronectin type-III domain-containing protein.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.538
C3XU10_BRAFL	C3ZME4_BRAFL	C3XU10	C3ZME4	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.508
C3XU10_BRAFL	C3ZP87_BRAFL	C3XU10	C3ZP87	Fibronectin type-III domain-containing protein.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.537
C3XU10_BRAFL	C3ZQI4_BRAFL	C3XU10	C3ZQI4	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.933