(139 nodes) Chromosomal region network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YMQ0_BRAFL	SP-RING-type domain-containing protein. (252 aa)
	C3XQC9_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (288 aa)
	C3XQF4_BRAFL	Serine/threonine-protein phosphatase. (313 aa)
	C3XQJ4_BRAFL	F-box domain-containing protein. (195 aa)
	C3XQQ2_BRAFL	Lactamase_B domain-containing protein. (302 aa)
	C3XR47_BRAFL	Uncharacterized protein. (187 aa)
	C3XRH9_BRAFL	Nucleoporin_C domain-containing protein. (822 aa)
	C3XRW7_BRAFL	Uncharacterized protein. (1231 aa)
	C3XS08_BRAFL	Uncharacterized protein. (644 aa)
	C3XTH3_BRAFL	Uncharacterized protein. (217 aa)
	C3XTY8_BRAFL	Uncharacterized protein. (581 aa)
	C3XU84_BRAFL	Uncharacterized protein. (355 aa)
	C3XUK5_BRAFL	GFA domain-containing protein. (119 aa)
	C3XUP9_BRAFL	Uncharacterized protein. (163 aa)
	LIS1_BRAFL	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. (406 aa)
	C3XXK9_BRAFL	CS domain-containing protein. (153 aa)
	C3XYW0_BRAFL	Uncharacterized protein. (317 aa)
	C3XYZ5_BRAFL	Protein kinase domain-containing protein. (211 aa)
	C3XYZ6_BRAFL	BUB1 N-terminal domain-containing protein. (234 aa)
	C3Y025_BRAFL	Cnd3 domain-containing protein. (1021 aa)
	C3Y068_BRAFL	G-patch domain-containing protein. (264 aa)
	C3Y073_BRAFL	Importin N-terminal domain-containing protein. (1069 aa)
	C3Y0C2_BRAFL	Uncharacterized protein. (1564 aa)
	C3Y0D1_BRAFL	CENP-F_N domain-containing protein. (130 aa)
	C3Y0I8_BRAFL	Protein kinase domain-containing protein. (460 aa)
	C3Y1B9_BRAFL	zf-RING-like domain-containing protein. (281 aa)
	C3Y1F4_BRAFL	Uncharacterized protein. (288 aa)
	C3Y1S5_BRAFL	SMC_N domain-containing protein. (1096 aa)
	C3Y1W8_BRAFL	Uncharacterized protein. (720 aa)
	C3Y212_BRAFL	Deacetylase sirtuin-type domain-containing protein. (414 aa)
	C3Y221_BRAFL	Uncharacterized protein. (313 aa)
	C3Y238_BRAFL	Uncharacterized protein. (158 aa)
	C3Y4B4_BRAFL	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (524 aa)
	C3Y4U9_BRAFL	Uncharacterized protein. (120 aa)
	C3Y528_BRAFL	Uncharacterized protein. (1907 aa)
	C3Y547_BRAFL	SET domain-containing protein. (312 aa)
	C3Y5K6_BRAFL	DNA polymerase. (1286 aa)
	C3Y5L4_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (585 aa)
	C3Y5S4_BRAFL	Uncharacterized protein. (334 aa)
	C3Y7A7_BRAFL	WD_REPEATS_REGION domain-containing protein. (320 aa)
	C3Y7L2_BRAFL	INCENP_ARK-bind domain-containing protein. (1201 aa)
	C3Y937_BRAFL	Uncharacterized protein. (427 aa)
	C3Y9K6_BRAFL	Uncharacterized protein. (846 aa)
	C3YA66_BRAFL	Uncharacterized protein. (348 aa)
	C3YBF4_BRAFL	Uncharacterized protein. (2359 aa)
	C3YCZ2_BRAFL	Craniofacial development protein 1; May play a role during embryogenesis. (285 aa)
	C3YD16_BRAFL	Telo_bind domain-containing protein. (396 aa)
	C3YF01_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (598 aa)
	C3YF60_BRAFL	Uncharacterized protein. (484 aa)
	C3YFG1_BRAFL	FHA domain-containing protein. (721 aa)
	C3YG44_BRAFL	Uncharacterized protein. (263 aa)
	C3YH55_BRAFL	Uncharacterized protein. (579 aa)
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	C3YID2_BRAFL	WD_REPEATS_REGION domain-containing protein. (187 aa)
	C3YII8_BRAFL	CENP-C_C domain-containing protein. (1118 aa)
	C3YIV6_BRAFL	Uncharacterized protein. (222 aa)
	C3YJ18_BRAFL	Uncharacterized protein. (349 aa)
	C3YJ64_BRAFL	CAP-Gly domain-containing protein. (113 aa)
	C3YJ65_BRAFL	Dynactin domain-containing protein. (1139 aa)
	C3YK10_BRAFL	SMC hinge domain-containing protein. (1155 aa)
	C3YL13_BRAFL	Histone acetyltransferase type B catalytic subunit. (404 aa)
	C3XPW3_BRAFL	Uncharacterized protein. (484 aa)
	C3YNS7_BRAFL	Uncharacterized protein. (277 aa)
	C3YQU2_BRAFL	Uncharacterized protein. (1003 aa)
	C3YV06_BRAFL	CCHC-type domain-containing protein. (999 aa)
	C3YV08_BRAFL	Uncharacterized protein. (196 aa)
	C3YV10_BRAFL	Uncharacterized protein. (133 aa)
	C3YV12_BRAFL	Helicase C-terminal domain-containing protein. (807 aa)
	C3YV14_BRAFL	Helicase C-terminal domain-containing protein. (503 aa)
	C3YV80_BRAFL	Lactamase_B domain-containing protein. (319 aa)
	C3YVY6_BRAFL	RECA_2 domain-containing protein. (103 aa)
	C3YW70_BRAFL	Uncharacterized protein. (306 aa)
	C3YWA5_BRAFL	AAA_23 domain-containing protein. (187 aa)
	C3YWT5_BRAFL	C2H2-type domain-containing protein. (540 aa)
	C3YXB5_BRAFL	Uncharacterized protein. (368 aa)
	C3YXC1_BRAFL	WD_REPEATS_REGION domain-containing protein. (383 aa)
	C3YXD2_BRAFL	Mis18 domain-containing protein. (303 aa)
	C3YZ02_BRAFL	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family. (1017 aa)
	C3YZ79_BRAFL	Uncharacterized protein. (310 aa)
	C3YZQ2_BRAFL	Cytosine-specific methyltransferase. (1275 aa)
	C3YZR1_BRAFL	Uncharacterized protein. (490 aa)
	C3Z060_BRAFL	Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (397 aa)
	C3Z1A9_BRAFL	Nbl1_Borealin_N domain-containing protein. (327 aa)
	C3Z2H0_BRAFL	Cnd1 domain-containing protein. (1141 aa)
	C3Z3N5_BRAFL	Spc7 domain-containing protein. (1713 aa)
	C3Z434_BRAFL	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (311 aa)
	C3Z479_BRAFL	WD_REPEATS_REGION domain-containing protein. (742 aa)
	C3Z4J5_BRAFL	Uncharacterized protein. (2574 aa)
	C3Z5Z2_BRAFL	HORMA domain-containing protein. (204 aa)
	C3Z6R3_BRAFL	NUDE_C domain-containing protein. (366 aa)
	C3Z7G6_BRAFL	Uncharacterized protein. (203 aa)
	C3Z7W6_BRAFL	Helicase ATP-binding domain-containing protein. (664 aa)
	C3Z7W7_BRAFL	Helicase C-terminal domain-containing protein. (650 aa)
	C3Z7Y2_BRAFL	Uncharacterized protein. (327 aa)
	C3Z9J2_BRAFL	Uncharacterized protein. (337 aa)
	C3ZA80_BRAFL	Uncharacterized protein. (1140 aa)
	C3ZAS6_BRAFL	Helicase C-terminal domain-containing protein. (606 aa)
	C3ZAS8_BRAFL	Uncharacterized protein. (1098 aa)
	C3ZDE1_BRAFL	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (323 aa)
	C3ZE81_BRAFL	Uncharacterized protein. (517 aa)
	C3ZEN4_BRAFL	Mre11_DNA_bind domain-containing protein. (441 aa)
	C3ZEY6_BRAFL	CAP-Gly domain-containing protein. (233 aa)
	C3ZF60_BRAFL	WD_REPEATS_REGION domain-containing protein. (434 aa)
	C3ZFR4_BRAFL	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (1032 aa)
	C3ZH71_BRAFL	TOG domain-containing protein. (228 aa)
	C3ZHM8_BRAFL	Uncharacterized protein. (252 aa)
	C3ZHN8_BRAFL	G-patch domain-containing protein. (364 aa)
	C3ZHW1_BRAFL	Uncharacterized protein. (1570 aa)
	C3ZI67_BRAFL	TPR_REGION domain-containing protein. (987 aa)
	C3ZIA7_BRAFL	Helicase C-terminal domain-containing protein. (118 aa)
	C3ZJT9_BRAFL	Uncharacterized protein. (109 aa)
	C3ZK04_BRAFL	ELYS domain-containing protein. (1093 aa)
	C3ZK08_BRAFL	Uncharacterized protein. (503 aa)
	C3ZLH8_BRAFL	Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. (804 aa)
	C3ZNW9_BRAFL	ERCC4 domain-containing protein. (515 aa)
	C3ZNX8_BRAFL	Uncharacterized protein. (233 aa)
	C3ZPA3_BRAFL	Daxx domain-containing protein. (323 aa)
	C3ZQ21_BRAFL	HTH myb-type domain-containing protein. (55 aa)
	C3ZQJ9_BRAFL	Uncharacterized protein. (707 aa)
	C3ZQM1_BRAFL	Homeobox domain-containing protein. (171 aa)
	C3ZR70_BRAFL	Uncharacterized protein. (379 aa)
	C3ZRG1_BRAFL	F-box domain-containing protein. (195 aa)
	C3ZRS5_BRAFL	Uncharacterized protein. (212 aa)
	C3ZRT1_BRAFL	Uncharacterized protein. (150 aa)
	C3ZS00_BRAFL	SMC_N domain-containing protein. (1059 aa)
	C3ZS53_BRAFL	Uncharacterized protein. (1119 aa)
	C3ZSM7_BRAFL	Ku domain-containing protein. (716 aa)
	C3ZSR0_BRAFL	CBFD_NFYB_HMF domain-containing protein. (125 aa)
	C3ZUN4_BRAFL	CCHC-type domain-containing protein. (583 aa)
	C3ZX51_BRAFL	Uncharacterized protein. (175 aa)
	C3ZXI5_BRAFL	Homeobox domain-containing protein. (430 aa)
	C3ZXT7_BRAFL	Uncharacterized protein. (572 aa)
	C3ZZH4_BRAFL	Uncharacterized protein. (541 aa)
	C3ZZN2_BRAFL	Uncharacterized protein. (268 aa)
	C3ZZY1_BRAFL	PHD-type domain-containing protein. (444 aa)
	C4A021_BRAFL	WD_REPEATS_REGION domain-containing protein. (429 aa)
	C4A088_BRAFL	BTB domain-containing protein. (2428 aa)
	C3XPS2_BRAFL	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1451 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPS2_BRAFL	C3XRW7_BRAFL	C3XPS2	C3XRW7	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Uncharacterized protein.	0.501
C3XPS2_BRAFL	C3XYZ5_BRAFL	C3XPS2	C3XYZ5	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Protein kinase domain-containing protein.	0.455
C3XPS2_BRAFL	C3XYZ6_BRAFL	C3XPS2	C3XYZ6	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	BUB1 N-terminal domain-containing protein.	0.437
C3XPS2_BRAFL	C3Y025_BRAFL	C3XPS2	C3Y025	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Cnd3 domain-containing protein.	0.997
C3XPS2_BRAFL	C3Y0D1_BRAFL	C3XPS2	C3Y0D1	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	CENP-F_N domain-containing protein.	0.439
C3XPS2_BRAFL	C3Y1S5_BRAFL	C3XPS2	C3Y1S5	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	SMC_N domain-containing protein.	0.919
C3XPS2_BRAFL	C3Y528_BRAFL	C3XPS2	C3Y528	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Uncharacterized protein.	0.620
C3XPS2_BRAFL	C3Y7L2_BRAFL	C3XPS2	C3Y7L2	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	INCENP_ARK-bind domain-containing protein.	0.560
C3XPS2_BRAFL	C3YG44_BRAFL	C3XPS2	C3YG44	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Uncharacterized protein.	0.426
C3XPS2_BRAFL	C3YK10_BRAFL	C3XPS2	C3YK10	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	SMC hinge domain-containing protein.	0.999
C3XPS2_BRAFL	C3Z1A9_BRAFL	C3XPS2	C3Z1A9	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Nbl1_Borealin_N domain-containing protein.	0.504
C3XPS2_BRAFL	C3Z2H0_BRAFL	C3XPS2	C3Z2H0	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Cnd1 domain-containing protein.	0.751
C3XPS2_BRAFL	C3Z5Z2_BRAFL	C3XPS2	C3Z5Z2	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	HORMA domain-containing protein.	0.450
C3XPS2_BRAFL	C3ZJT9_BRAFL	C3XPS2	C3ZJT9	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Uncharacterized protein.	0.430
C3XPS2_BRAFL	C3ZS00_BRAFL	C3XPS2	C3ZS00	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	SMC_N domain-containing protein.	0.879
C3XPW3_BRAFL	C3XYZ5_BRAFL	C3XPW3	C3XYZ5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.509
C3XPW3_BRAFL	C3XYZ6_BRAFL	C3XPW3	C3XYZ6	Uncharacterized protein.	BUB1 N-terminal domain-containing protein.	0.615
C3XPW3_BRAFL	C3Y5S4_BRAFL	C3XPW3	C3Y5S4	Uncharacterized protein.	Uncharacterized protein.	0.590
C3XPW3_BRAFL	C3Y7L2_BRAFL	C3XPW3	C3Y7L2	Uncharacterized protein.	INCENP_ARK-bind domain-containing protein.	0.571
C3XPW3_BRAFL	C3YXD2_BRAFL	C3XPW3	C3YXD2	Uncharacterized protein.	Mis18 domain-containing protein.	0.519