(25 nodes) Cell cortex region network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZH71_BRAFL	TOG domain-containing protein. (228 aa)
	C3Z2N4_BRAFL	Uncharacterized protein. (94 aa)
	C3YZV8_BRAFL	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (248 aa)
	C3YZ27_BRAFL	PH domain-containing protein. (264 aa)
	C3YZ26_BRAFL	DH domain-containing protein. (261 aa)
	C3YUV2_BRAFL	TPR_REGION domain-containing protein. (151 aa)
	C3YUR3_BRAFL	INSC_LBD domain-containing protein. (543 aa)
	C3YPR4_BRAFL	C2 domain-containing protein. (85 aa)
	C3YJ69_BRAFL	2-Hacid_dh_C domain-containing protein. (253 aa)
	C3ZAJ1_BRAFL	Uncharacterized protein. (599 aa)
	C3Z7Y7_BRAFL	TPR_REGION domain-containing protein. (318 aa)
	C3ZHY9_BRAFL	Uncharacterized protein. (537 aa)
	C3ZQN1_BRAFL	FYVE-type domain-containing protein. (561 aa)
	C3ZQN2_BRAFL	PDZ domain-containing protein. (118 aa)
	C3ZQN3_BRAFL	C2 domain-containing protein. (116 aa)
	C3ZXS7_BRAFL	TPR_REGION domain-containing protein. (273 aa)
	C3YJ65_BRAFL	Dynactin domain-containing protein. (1139 aa)
	C3YJ64_BRAFL	CAP-Gly domain-containing protein. (113 aa)
	C3Y7Q2_BRAFL	TPR_REGION domain-containing protein. (280 aa)
	C3Y7F4_BRAFL	Uncharacterized protein. (596 aa)
	C3Y719_BRAFL	Uncharacterized protein. (391 aa)
	C3Y6U6_BRAFL	MHD2 domain-containing protein. (1621 aa)
	C3Y1H2_BRAFL	Uncharacterized protein. (1144 aa)
	C3Y1H1_BRAFL	C2 domain-containing protein. (138 aa)
	C3XRU4_BRAFL	PH domain-containing protein. (1256 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y1H1_BRAFL	C3Y1H2_BRAFL	C3Y1H1	C3Y1H2	C2 domain-containing protein.	Uncharacterized protein.	0.900
C3Y1H1_BRAFL	C3Z2N4_BRAFL	C3Y1H1	C3Z2N4	C2 domain-containing protein.	Uncharacterized protein.	0.429
C3Y1H1_BRAFL	C3ZQN1_BRAFL	C3Y1H1	C3ZQN1	C2 domain-containing protein.	FYVE-type domain-containing protein.	0.715
C3Y1H1_BRAFL	C3ZQN2_BRAFL	C3Y1H1	C3ZQN2	C2 domain-containing protein.	PDZ domain-containing protein.	0.997
C3Y1H1_BRAFL	C3ZQN3_BRAFL	C3Y1H1	C3ZQN3	C2 domain-containing protein.	C2 domain-containing protein.	0.997
C3Y1H2_BRAFL	C3Y1H1_BRAFL	C3Y1H2	C3Y1H1	Uncharacterized protein.	C2 domain-containing protein.	0.900
C3Y1H2_BRAFL	C3Z2N4_BRAFL	C3Y1H2	C3Z2N4	Uncharacterized protein.	Uncharacterized protein.	0.429
C3Y1H2_BRAFL	C3ZQN1_BRAFL	C3Y1H2	C3ZQN1	Uncharacterized protein.	FYVE-type domain-containing protein.	0.805
C3Y1H2_BRAFL	C3ZQN2_BRAFL	C3Y1H2	C3ZQN2	Uncharacterized protein.	PDZ domain-containing protein.	0.997
C3Y1H2_BRAFL	C3ZQN3_BRAFL	C3Y1H2	C3ZQN3	Uncharacterized protein.	C2 domain-containing protein.	0.997
C3Y6U6_BRAFL	C3ZQN1_BRAFL	C3Y6U6	C3ZQN1	MHD2 domain-containing protein.	FYVE-type domain-containing protein.	0.575
C3Y6U6_BRAFL	C3ZQN2_BRAFL	C3Y6U6	C3ZQN2	MHD2 domain-containing protein.	PDZ domain-containing protein.	0.997
C3Y6U6_BRAFL	C3ZQN3_BRAFL	C3Y6U6	C3ZQN3	MHD2 domain-containing protein.	C2 domain-containing protein.	0.997
C3Y719_BRAFL	C3YUR3_BRAFL	C3Y719	C3YUR3	Uncharacterized protein.	INSC_LBD domain-containing protein.	0.475
C3Y719_BRAFL	C3Z7Y7_BRAFL	C3Y719	C3Z7Y7	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.900
C3Y7F4_BRAFL	C3YJ69_BRAFL	C3Y7F4	C3YJ69	Uncharacterized protein.	2-Hacid_dh_C domain-containing protein.	0.745
C3Y7F4_BRAFL	C3YPR4_BRAFL	C3Y7F4	C3YPR4	Uncharacterized protein.	C2 domain-containing protein.	0.577
C3Y7F4_BRAFL	C3Z2N4_BRAFL	C3Y7F4	C3Z2N4	Uncharacterized protein.	Uncharacterized protein.	0.444
C3Y7Q2_BRAFL	C3YUR3_BRAFL	C3Y7Q2	C3YUR3	TPR_REGION domain-containing protein.	INSC_LBD domain-containing protein.	0.475
C3YJ69_BRAFL	C3Y7F4_BRAFL	C3YJ69	C3Y7F4	2-Hacid_dh_C domain-containing protein.	Uncharacterized protein.	0.745