STRINGSTRING
C3YZ80_BRAFL C3YZ80_BRAFL C3Y2J9_BRAFL C3Y2J9_BRAFL C3XWH9_BRAFL C3XWH9_BRAFL C3XQU3_BRAFL C3XQU3_BRAFL C3Z912_BRAFL C3Z912_BRAFL C3Z7H4_BRAFL C3Z7H4_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3YZ80_BRAFLUncharacterized protein. (894 aa)
C3Y2J9_BRAFLENDO3c domain-containing protein. (401 aa)
C3XWH9_BRAFLKH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (226 aa)
C3XQU3_BRAFLFe2OG dioxygenase domain-containing protein. (365 aa)
C3Z912_BRAFLH2TH domain-containing protein. (199 aa)
C3Z7H4_BRAFLENDO3c domain-containing protein. (239 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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