STRINGSTRING
C3ZM41_BRAFL C3ZM41_BRAFL C3ZMY3_BRAFL C3ZMY3_BRAFL C3ZP40_BRAFL C3ZP40_BRAFL C3ZQG4_BRAFL C3ZQG4_BRAFL C3ZYB0_BRAFL C3ZYB0_BRAFL C4A0M0_BRAFL C4A0M0_BRAFL O77161_BRAFL O77161_BRAFL Msx Msx C3Y9A3_BRAFL C3Y9A3_BRAFL C3XQ73_BRAFL C3XQ73_BRAFL C3XVK0_BRAFL C3XVK0_BRAFL C3XVM0_BRAFL C3XVM0_BRAFL C3XVY8_BRAFL C3XVY8_BRAFL C3Y4R0_BRAFL C3Y4R0_BRAFL C3YA38_BRAFL C3YA38_BRAFL C3YH71_BRAFL C3YH71_BRAFL C3YH73_BRAFL C3YH73_BRAFL C3YKX2_BRAFL C3YKX2_BRAFL C3YWE6_BRAFL C3YWE6_BRAFL C3YX63_BRAFL C3YX63_BRAFL C3Z2E7_BRAFL C3Z2E7_BRAFL C3Z427_BRAFL C3Z427_BRAFL C3Z502_BRAFL C3Z502_BRAFL C3Z7D9_BRAFL C3Z7D9_BRAFL C3Z7I2_BRAFL C3Z7I2_BRAFL C3Z9X0_BRAFL C3Z9X0_BRAFL C3ZBQ5_BRAFL C3ZBQ5_BRAFL C3ZLH8_BRAFL C3ZLH8_BRAFL C3ZM40_BRAFL C3ZM40_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3ZM41_BRAFLBrix domain-containing protein. (120 aa)
C3ZMY3_BRAFLUncharacterized protein. (516 aa)
C3ZP40_BRAFLUncharacterized protein. (171 aa)
C3ZQG4_BRAFLUncharacterized protein. (183 aa)
C3ZYB0_BRAFLGST C-terminal domain-containing protein. (178 aa)
C4A0M0_BRAFLSET domain-containing protein. (202 aa)
O77161_BRAFLSnail. (253 aa)
MsxMuscle segment homeobox. (275 aa)
C3Y9A3_BRAFLATPase_AAA_core domain-containing protein. (2025 aa)
C3XQ73_BRAFLVentral anterior homeobox. (287 aa)
C3XVK0_BRAFLSET domain-containing protein. (131 aa)
C3XVM0_BRAFLUncharacterized protein. (72 aa)
C3XVY8_BRAFLE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (414 aa)
C3Y4R0_BRAFLUncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (167 aa)
C3YA38_BRAFLSET domain-containing protein. (245 aa)
C3YH71_BRAFLUncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
C3YH73_BRAFLFAT domain-containing protein. (2357 aa)
C3YKX2_BRAFLDeacetylase sirtuin-type domain-containing protein. (312 aa)
C3YWE6_BRAFLPCI domain-containing protein. (429 aa)
C3YX63_BRAFLCAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (354 aa)
C3Z2E7_BRAFLMuscle-specific homeobox-like protein. (307 aa)
C3Z427_BRAFLFYVE-type domain-containing protein. (325 aa)
C3Z502_BRAFLE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (434 aa)
C3Z7D9_BRAFLRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (336 aa)
C3Z7I2_BRAFLUncharacterized protein. (260 aa)
C3Z9X0_BRAFLUncharacterized protein; Belongs to the PI3/PI4-kinase family. (2531 aa)
C3ZBQ5_BRAFLRibosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (606 aa)
C3ZLH8_BRAFLProbable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. (804 aa)
C3ZM40_BRAFLBrix domain-containing protein. (311 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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