(35 nodes) Regulation of cilium assembly network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZGJ9_BRAFL	Uncharacterized protein. (3187 aa)
	C3XPS5_BRAFL	Uncharacterized protein. (444 aa)
	C3XRB2_BRAFL	Uncharacterized protein. (8372 aa)
	C3XU82_BRAFL	C2H2-type domain-containing protein. (171 aa)
	C3Y204_BRAFL	Uncharacterized protein. (596 aa)
	C3Y205_BRAFL	Uncharacterized protein. (454 aa)
	C3Y3I3_BRAFL	Uncharacterized protein. (1461 aa)
	C3Y6T6_BRAFL	Uncharacterized protein. (500 aa)
	C3Y9G8_BRAFL	WD_REPEATS_REGION domain-containing protein. (1402 aa)
	C3YA20_BRAFL	Protein kinase domain-containing protein. (689 aa)
	C3YAN4_BRAFL	MYND-type domain-containing protein. (427 aa)
	C3YEG9_BRAFL	Uncharacterized protein. (425 aa)
	C3YI17_BRAFL	Uncharacterized protein. (819 aa)
	C3YL59_BRAFL	Mitogen-activated protein kinase. (321 aa)
	C3YRE8_BRAFL	Notochord homeobox-like protein. (281 aa)
	C3YTZ3_BRAFL	Uncharacterized protein. (549 aa)
	C3YV23_BRAFL	Uncharacterized protein. (872 aa)
	C3YVF5_BRAFL	Rab-GAP TBC domain-containing protein. (993 aa)
	C3Z3W6_BRAFL	Uncharacterized protein. (376 aa)
	C3Z7E5_BRAFL	Uncharacterized protein. (1232 aa)
	C3ZBQ7_BRAFL	Uncharacterized protein. (434 aa)
	C3ZCU0_BRAFL	Mitogen-activated protein kinase. (515 aa)
	C3ZF21_BRAFL	Uncharacterized protein. (1260 aa)
	C3ZGJ8_BRAFL	Uncharacterized protein. (363 aa)
	C3ZGP7_BRAFL	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1297 aa)
	C3ZJI7_BRAFL	Rab-GAP TBC domain-containing protein. (289 aa)
	C3ZLV7_BRAFL	PPP1R35_C domain-containing protein. (325 aa)
	C3ZNT2_BRAFL	Autophagy protein 5; Involved in autophagic vesicle formation. (261 aa)
	C3ZQC3_BRAFL	Uncharacterized protein. (1892 aa)
	C3ZXX8_BRAFL	Protein kinase domain-containing protein. (283 aa)
	C3ZYE3_BRAFL	Uncharacterized protein. (475 aa)
	C3ZYN6_BRAFL	Fibronectin type-III domain-containing protein. (1377 aa)
	C3ZYN8_BRAFL	Uncharacterized protein. (202 aa)
	C3ZYP0_BRAFL	Uncharacterized protein. (199 aa)
	C3ZYV4_BRAFL	Uncharacterized protein. (1042 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y204_BRAFL	C3Y205_BRAFL	C3Y204	C3Y205	Uncharacterized protein.	Uncharacterized protein.	0.942
C3Y205_BRAFL	C3Y204_BRAFL	C3Y205	C3Y204	Uncharacterized protein.	Uncharacterized protein.	0.942
C3Y9G8_BRAFL	C3YAN4_BRAFL	C3Y9G8	C3YAN4	WD_REPEATS_REGION domain-containing protein.	MYND-type domain-containing protein.	0.522
C3Y9G8_BRAFL	C3YEG9_BRAFL	C3Y9G8	C3YEG9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.403
C3Y9G8_BRAFL	C3YI17_BRAFL	C3Y9G8	C3YI17	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.847
C3Y9G8_BRAFL	C3Z3W6_BRAFL	C3Y9G8	C3Z3W6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.775
C3Y9G8_BRAFL	C3ZYE3_BRAFL	C3Y9G8	C3ZYE3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.403
C3YAN4_BRAFL	C3Y9G8_BRAFL	C3YAN4	C3Y9G8	MYND-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.522
C3YEG9_BRAFL	C3Y9G8_BRAFL	C3YEG9	C3Y9G8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.403
C3YI17_BRAFL	C3Y9G8_BRAFL	C3YI17	C3Y9G8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.847
C3YI17_BRAFL	C3Z3W6_BRAFL	C3YI17	C3Z3W6	Uncharacterized protein.	Uncharacterized protein.	0.823
C3Z3W6_BRAFL	C3Y9G8_BRAFL	C3Z3W6	C3Y9G8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.775
C3Z3W6_BRAFL	C3YI17_BRAFL	C3Z3W6	C3YI17	Uncharacterized protein.	Uncharacterized protein.	0.823
C3Z7E5_BRAFL	C3ZBQ7_BRAFL	C3Z7E5	C3ZBQ7	Uncharacterized protein.	Uncharacterized protein.	0.505
C3Z7E5_BRAFL	C3ZGP7_BRAFL	C3Z7E5	C3ZGP7	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.611
C3Z7E5_BRAFL	C3ZYN6_BRAFL	C3Z7E5	C3ZYN6	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.964
C3ZBQ7_BRAFL	C3Z7E5_BRAFL	C3ZBQ7	C3Z7E5	Uncharacterized protein.	Uncharacterized protein.	0.505
C3ZGJ8_BRAFL	C3ZGJ9_BRAFL	C3ZGJ8	C3ZGJ9	Uncharacterized protein.	Uncharacterized protein.	0.943
C3ZGJ9_BRAFL	C3ZGJ8_BRAFL	C3ZGJ9	C3ZGJ8	Uncharacterized protein.	Uncharacterized protein.	0.943
C3ZGP7_BRAFL	C3Z7E5_BRAFL	C3ZGP7	C3Z7E5	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.611