STRINGSTRING
C3ZN29_BRAFL C3ZN29_BRAFL C3XUW8_BRAFL C3XUW8_BRAFL C3Y0C2_BRAFL C3Y0C2_BRAFL C3Y505_BRAFL C3Y505_BRAFL C3Y529_BRAFL C3Y529_BRAFL C3Y5H5_BRAFL C3Y5H5_BRAFL C3YIJ3_BRAFL C3YIJ3_BRAFL C3YUF9_BRAFL C3YUF9_BRAFL C3YZQ2_BRAFL C3YZQ2_BRAFL C3Z2R2_BRAFL C3Z2R2_BRAFL C3Z3Y2_BRAFL C3Z3Y2_BRAFL C3Z480_BRAFL C3Z480_BRAFL C3Z648_BRAFL C3Z648_BRAFL C3ZLH8_BRAFL C3ZLH8_BRAFL C3ZVZ2_BRAFL C3ZVZ2_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3ZN29_BRAFLCW-type domain-containing protein. (569 aa)
C3XUW8_BRAFLUncharacterized protein. (270 aa)
C3Y0C2_BRAFLUncharacterized protein. (1564 aa)
C3Y505_BRAFLUncharacterized protein. (572 aa)
C3Y529_BRAFLTPR_REGION domain-containing protein. (1183 aa)
C3Y5H5_BRAFLUncharacterized protein. (1490 aa)
C3YIJ3_BRAFLUncharacterized protein. (479 aa)
C3YUF9_BRAFLDUF3504 domain-containing protein. (297 aa)
C3YZQ2_BRAFLCytosine-specific methyltransferase. (1275 aa)
C3Z2R2_BRAFLDUF3715 domain-containing protein. (154 aa)
C3Z3Y2_BRAFLFACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (710 aa)
C3Z480_BRAFLFe2OG dioxygenase domain-containing protein. (303 aa)
C3Z648_BRAFLCW-type domain-containing protein. (769 aa)
C3ZLH8_BRAFLProbable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. (804 aa)
C3ZVZ2_BRAFLUncharacterized protein; Belongs to the MT-A70-like family. (244 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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