STRINGSTRING
C3Y3B0_BRAFL C3Y3B0_BRAFL C3XPH0_BRAFL C3XPH0_BRAFL C3XPP5_BRAFL C3XPP5_BRAFL C3XPP6_BRAFL C3XPP6_BRAFL C3XPX8_BRAFL C3XPX8_BRAFL C3XQU2_BRAFL C3XQU2_BRAFL C3XU17_BRAFL C3XU17_BRAFL C3XU94_BRAFL C3XU94_BRAFL C3XVT6_BRAFL C3XVT6_BRAFL C3XW58_BRAFL C3XW58_BRAFL PAN3 PAN3 C3XWA2_BRAFL C3XWA2_BRAFL C3XYF0_BRAFL C3XYF0_BRAFL C3XZ12_BRAFL C3XZ12_BRAFL C3Y458_BRAFL C3Y458_BRAFL C3Y7T7_BRAFL C3Y7T7_BRAFL C3Y7T8_BRAFL C3Y7T8_BRAFL C3YC21_BRAFL C3YC21_BRAFL C3YC79_BRAFL C3YC79_BRAFL C3YC97_BRAFL C3YC97_BRAFL C3YCP5_BRAFL C3YCP5_BRAFL C3YEG1_BRAFL C3YEG1_BRAFL C3YFD7_BRAFL C3YFD7_BRAFL C3YFU8_BRAFL C3YFU8_BRAFL C3YG12_BRAFL C3YG12_BRAFL C3YIW3_BRAFL C3YIW3_BRAFL C3YKW9_BRAFL C3YKW9_BRAFL C3YM54_BRAFL C3YM54_BRAFL C3YN74_BRAFL C3YN74_BRAFL C3YQF0_BRAFL C3YQF0_BRAFL PAN2 PAN2 C3YVN0_BRAFL C3YVN0_BRAFL C3YWD4_BRAFL C3YWD4_BRAFL C3YWD5_BRAFL C3YWD5_BRAFL C3YZU4_BRAFL C3YZU4_BRAFL C3Z2F7_BRAFL C3Z2F7_BRAFL C3Z6B1_BRAFL C3Z6B1_BRAFL C3Z7Q9_BRAFL C3Z7Q9_BRAFL C3ZB64_BRAFL C3ZB64_BRAFL C3ZB66_BRAFL C3ZB66_BRAFL C3ZB90_BRAFL C3ZB90_BRAFL C3ZB91_BRAFL C3ZB91_BRAFL C3ZEK3_BRAFL C3ZEK3_BRAFL C3ZG24_BRAFL C3ZG24_BRAFL C3ZIA7_BRAFL C3ZIA7_BRAFL C3ZJT1_BRAFL C3ZJT1_BRAFL C3ZLS8_BRAFL C3ZLS8_BRAFL C3ZQZ0_BRAFL C3ZQZ0_BRAFL C3ZTA6_BRAFL C3ZTA6_BRAFL C3ZTE3_BRAFL C3ZTE3_BRAFL C3ZTI1_BRAFL C3ZTI1_BRAFL C3ZVZ7_BRAFL C3ZVZ7_BRAFL C3ZVZ9_BRAFL C3ZVZ9_BRAFL C3ZYQ0_BRAFL C3ZYQ0_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3Y3B0_BRAFLEndo/exonuclease/phosphatase domain-containing protein. (429 aa)
C3XPH0_BRAFLUncharacterized protein. (365 aa)
C3XPP5_BRAFLUncharacterized protein. (321 aa)
C3XPP6_BRAFLUncharacterized protein. (152 aa)
C3XPX8_BRAFLRPOL4c domain-containing protein. (142 aa)
C3XQU2_BRAFLSKIP_SNW domain-containing protein. (543 aa)
C3XU17_BRAFLUncharacterized protein. (291 aa)
C3XU94_BRAFLTPR_REGION domain-containing protein. (423 aa)
C3XVT6_BRAFLU6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family. (471 aa)
C3XW58_BRAFLUncharacterized protein. (288 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (760 aa)
C3XWA2_BRAFLPeptidase S59 domain-containing protein. (1834 aa)
C3XYF0_BRAFLRNB domain-containing protein; Belongs to the RNR ribonuclease family. (813 aa)
C3XZ12_BRAFLSAM domain-containing protein. (688 aa)
C3Y458_BRAFLDNA_mis_repair domain-containing protein. (717 aa)
C3Y7T7_BRAFLRRM domain-containing protein. (187 aa)
C3Y7T8_BRAFLRRM domain-containing protein. (183 aa)
C3YC21_BRAFLRRM domain-containing protein. (560 aa)
C3YC79_BRAFLUncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (1387 aa)
C3YC97_BRAFLRNA_bind domain-containing protein. (490 aa)
C3YCP5_BRAFLUncharacterized protein. (1057 aa)
C3YEG1_BRAFLEndo/exonuclease/phosphatase domain-containing protein. (566 aa)
C3YFD7_BRAFLUncharacterized protein; Belongs to the MT-A70-like family. (568 aa)
C3YFU8_BRAFLUncharacterized protein; Belongs to the MT-A70-like family. (164 aa)
C3YG12_BRAFLPAT1 domain-containing protein. (1191 aa)
C3YIW3_BRAFLUncharacterized protein. (356 aa)
C3YKW9_BRAFLEndo/exonuclease/phosphatase domain-containing protein. (554 aa)
C3YM54_BRAFLKH_dom_type_1 domain-containing protein. (186 aa)
C3YN74_BRAFLUncharacterized protein. (428 aa)
C3YQF0_BRAFLYTH domain-containing protein. (559 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1288 aa)
C3YVN0_BRAFLUncharacterized protein. (511 aa)
C3YWD4_BRAFLNot3 domain-containing protein. (398 aa)
C3YWD5_BRAFLNOT2_3_5 domain-containing protein. (286 aa)
C3YZU4_BRAFLUncharacterized protein. (444 aa)
C3Z2F7_BRAFLS1 motif domain-containing protein. (723 aa)
C3Z6B1_BRAFLNudix hydrolase domain-containing protein. (596 aa)
C3Z7Q9_BRAFLNOT2_3_5 domain-containing protein. (714 aa)
C3ZB64_BRAFLUncharacterized protein. (136 aa)
C3ZB66_BRAFLUncharacterized protein. (135 aa)
C3ZB90_BRAFLUncharacterized protein. (1629 aa)
C3ZB91_BRAFLCNOT1_HEAT domain-containing protein. (918 aa)
C3ZEK3_BRAFLRRM domain-containing protein. (88 aa)
C3ZG24_BRAFLUncharacterized protein. (536 aa)
C3ZIA7_BRAFLHelicase C-terminal domain-containing protein. (118 aa)
C3ZJT1_BRAFLUBA domain-containing protein. (1431 aa)
C3ZLS8_BRAFLUncharacterized protein. (219 aa)
C3ZQZ0_BRAFLUncharacterized protein. (172 aa)
C3ZTA6_BRAFLS1 motif domain-containing protein. (279 aa)
C3ZTE3_BRAFLUncharacterized protein. (1290 aa)
C3ZTI1_BRAFLUncharacterized protein. (487 aa)
C3ZVZ7_BRAFLCCHC-type domain-containing protein. (187 aa)
C3ZVZ9_BRAFLUncharacterized protein. (105 aa)
C3ZYQ0_BRAFLEndo/exonuclease/phosphatase domain-containing protein. (370 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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