STRINGSTRING
C3YCV9_BRAFL C3YCV9_BRAFL C3Y198_BRAFL C3Y198_BRAFL C4A0W9_BRAFL C4A0W9_BRAFL Msx Msx C3Z2E7_BRAFL C3Z2E7_BRAFL C3YYX6_BRAFL C3YYX6_BRAFL RAB9A.1 RAB9A.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3YCV9_BRAFLUncharacterized protein. (230 aa)
C3Y198_BRAFLC2H2-type domain-containing protein. (130 aa)
C4A0W9_BRAFLUncharacterized protein. (179 aa)
MsxMuscle segment homeobox. (275 aa)
C3Z2E7_BRAFLMuscle-specific homeobox-like protein. (307 aa)
C3YYX6_BRAFLANK_REP_REGION domain-containing protein. (490 aa)
RAB9A.1Uncharacterized protein. (192 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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