(15 nodes) Spindle microtubule network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YRB4_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (179 aa)
	C3YN19_BRAFL	BTB domain-containing protein. (576 aa)
	C3XQC7_BRAFL	POLXc domain-containing protein. (186 aa)
	C3ZJF0_BRAFL	BTB domain-containing protein. (495 aa)
	C3Z6X5_BRAFL	Uncharacterized protein. (184 aa)
	C3YJP8_BRAFL	Uncharacterized protein. (141 aa)
	C3Y5L4_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (585 aa)
	C3Y4W7_BRAFL	Poly [ADP-ribose] polymerase. (2524 aa)
	C3Y4B5_BRAFL	TACC_C domain-containing protein. (1514 aa)
	C3Y2C7_BRAFL	HAUS6_N domain-containing protein. (1223 aa)
	C3Y2A9_BRAFL	BTB domain-containing protein. (196 aa)
	C3XZ84_BRAFL	Uncharacterized protein. (380 aa)
	C3XRW7_BRAFL	Uncharacterized protein. (1231 aa)
	C3YRD8_BRAFL	BTB domain-containing protein. (562 aa)
	C3XQC9_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (288 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQC9_BRAFL	C3XRW7_BRAFL	C3XQC9	C3XRW7	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.683
C3XQC9_BRAFL	C3Y5L4_BRAFL	C3XQC9	C3Y5L4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.952
C3XRW7_BRAFL	C3XQC9_BRAFL	C3XRW7	C3XQC9	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.683
C3XRW7_BRAFL	C3Y5L4_BRAFL	C3XRW7	C3Y5L4	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.406
C3Y5L4_BRAFL	C3XQC9_BRAFL	C3Y5L4	C3XQC9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.952
C3Y5L4_BRAFL	C3XRW7_BRAFL	C3Y5L4	C3XRW7	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.406