(7 nodes) Cdc73/Paf1 complex network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Z4E3_BRAFL	WD_REPEATS_REGION domain-containing protein. (274 aa)
	C3ZG24_BRAFL	Uncharacterized protein. (536 aa)
	C3ZQG2_BRAFL	Plus3 domain-containing protein. (605 aa)
	C3XR97_BRAFL	Uncharacterized protein. (198 aa)
	C3Y529_BRAFL	TPR_REGION domain-containing protein. (1183 aa)
	C3YA64_BRAFL	Uncharacterized protein. (352 aa)
	C3YMZ1_BRAFL	RING-type domain-containing protein. (361 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XR97_BRAFL	C3YA64_BRAFL	C3XR97	C3YA64	Uncharacterized protein.	Uncharacterized protein.	0.974
C3XR97_BRAFL	C3Z4E3_BRAFL	C3XR97	C3Z4E3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.453
C3XR97_BRAFL	C3ZG24_BRAFL	C3XR97	C3ZG24	Uncharacterized protein.	Uncharacterized protein.	0.974
C3XR97_BRAFL	C3ZQG2_BRAFL	C3XR97	C3ZQG2	Uncharacterized protein.	Plus3 domain-containing protein.	0.953
C3Y529_BRAFL	C3YA64_BRAFL	C3Y529	C3YA64	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.999
C3Y529_BRAFL	C3Z4E3_BRAFL	C3Y529	C3Z4E3	TPR_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.995
C3Y529_BRAFL	C3ZG24_BRAFL	C3Y529	C3ZG24	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.999
C3Y529_BRAFL	C3ZQG2_BRAFL	C3Y529	C3ZQG2	TPR_REGION domain-containing protein.	Plus3 domain-containing protein.	0.999
C3YA64_BRAFL	C3XR97_BRAFL	C3YA64	C3XR97	Uncharacterized protein.	Uncharacterized protein.	0.974
C3YA64_BRAFL	C3Y529_BRAFL	C3YA64	C3Y529	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.999
C3YA64_BRAFL	C3Z4E3_BRAFL	C3YA64	C3Z4E3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.990
C3YA64_BRAFL	C3ZG24_BRAFL	C3YA64	C3ZG24	Uncharacterized protein.	Uncharacterized protein.	0.999
C3YA64_BRAFL	C3ZQG2_BRAFL	C3YA64	C3ZQG2	Uncharacterized protein.	Plus3 domain-containing protein.	0.998
C3Z4E3_BRAFL	C3XR97_BRAFL	C3Z4E3	C3XR97	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.453
C3Z4E3_BRAFL	C3Y529_BRAFL	C3Z4E3	C3Y529	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.995
C3Z4E3_BRAFL	C3YA64_BRAFL	C3Z4E3	C3YA64	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.990
C3Z4E3_BRAFL	C3ZG24_BRAFL	C3Z4E3	C3ZG24	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.996
C3Z4E3_BRAFL	C3ZQG2_BRAFL	C3Z4E3	C3ZQG2	WD_REPEATS_REGION domain-containing protein.	Plus3 domain-containing protein.	0.979
C3ZG24_BRAFL	C3XR97_BRAFL	C3ZG24	C3XR97	Uncharacterized protein.	Uncharacterized protein.	0.974
C3ZG24_BRAFL	C3Y529_BRAFL	C3ZG24	C3Y529	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.999