(30 nodes) SCF ubiquitin ligase complex network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XPR4_BRAFL	Uncharacterized protein. (355 aa)
	C3XQ14_BRAFL	F-box domain-containing protein. (843 aa)
	C3XX63_BRAFL	F-box domain-containing protein. (514 aa)
	C3XXN0_BRAFL	RING-type domain-containing protein. (111 aa)
	C3Y1F7_BRAFL	F-box domain-containing protein. (414 aa)
	C3Y232_BRAFL	F-box domain-containing protein. (351 aa)
	C3Y2U8_BRAFL	Uncharacterized protein. (548 aa)
	BTRCa	Beta-transducin repeat containing protein, isoform a. (296 aa)
	C3Y6G1_BRAFL	Uncharacterized protein. (497 aa)
	C3Y7M2_BRAFL	Uncharacterized protein; Belongs to the peptidase C19 family. (1318 aa)
	C3Y7V1_BRAFL	Uncharacterized protein. (305 aa)
	C3YAW6_BRAFL	F-box domain-containing protein. (777 aa)
	C3YB35_BRAFL	Uncharacterized protein. (497 aa)
	C3YCM0_BRAFL	F-box domain-containing protein. (317 aa)
	C3YDV7_BRAFL	Uncharacterized protein. (361 aa)
	C3YLM6_BRAFL	F-box domain-containing protein. (645 aa)
	C3YM20_BRAFL	F-box domain-containing protein. (421 aa)
	C3YNN9_BRAFL	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (82 aa)
	C3YWA4_BRAFL	F-box domain-containing protein. (612 aa)
	C3YZR6_BRAFL	F-box domain-containing protein. (429 aa)
	C3Z1B4_BRAFL	Uncharacterized protein. (206 aa)
	C3Z2P1_BRAFL	F-box domain-containing protein. (398 aa)
	C3Z548_BRAFL	F-box domain-containing protein. (645 aa)
	C3Z7N7_BRAFL	F-box domain-containing protein; Belongs to the cyclin family. (784 aa)
	C3ZA57_BRAFL	F-box domain-containing protein. (843 aa)
	C3ZG59_BRAFL	Uncharacterized protein. (369 aa)
	C3ZJB9_BRAFL	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (74 aa)
	C3ZTZ1_BRAFL	Uncharacterized protein. (415 aa)
	C3ZX11_BRAFL	Uncharacterized protein. (493 aa)
	C3ZZX8_BRAFL	Uncharacterized protein. (285 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTRCa	C3XXN0_BRAFL	C3Y3Z8	C3XXN0	Beta-transducin repeat containing protein, isoform a.	RING-type domain-containing protein.	0.979
BTRCa	C3Y7M2_BRAFL	C3Y3Z8	C3Y7M2	Beta-transducin repeat containing protein, isoform a.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.473
BTRCa	C3YM20_BRAFL	C3Y3Z8	C3YM20	Beta-transducin repeat containing protein, isoform a.	F-box domain-containing protein.	0.712
C3XPR4_BRAFL	C3XXN0_BRAFL	C3XPR4	C3XXN0	Uncharacterized protein.	RING-type domain-containing protein.	0.616
C3XPR4_BRAFL	C3YCM0_BRAFL	C3XPR4	C3YCM0	Uncharacterized protein.	F-box domain-containing protein.	0.545
C3XPR4_BRAFL	C3Z2P1_BRAFL	C3XPR4	C3Z2P1	Uncharacterized protein.	F-box domain-containing protein.	0.410
C3XX63_BRAFL	C3XXN0_BRAFL	C3XX63	C3XXN0	F-box domain-containing protein.	RING-type domain-containing protein.	0.491
C3XXN0_BRAFL	BTRCa	C3XXN0	C3Y3Z8	RING-type domain-containing protein.	Beta-transducin repeat containing protein, isoform a.	0.979
C3XXN0_BRAFL	C3XPR4_BRAFL	C3XXN0	C3XPR4	RING-type domain-containing protein.	Uncharacterized protein.	0.616
C3XXN0_BRAFL	C3XX63_BRAFL	C3XXN0	C3XX63	RING-type domain-containing protein.	F-box domain-containing protein.	0.491
C3XXN0_BRAFL	C3Y232_BRAFL	C3XXN0	C3Y232	RING-type domain-containing protein.	F-box domain-containing protein.	0.688
C3XXN0_BRAFL	C3Y2U8_BRAFL	C3XXN0	C3Y2U8	RING-type domain-containing protein.	Uncharacterized protein.	0.724
C3XXN0_BRAFL	C3Y7V1_BRAFL	C3XXN0	C3Y7V1	RING-type domain-containing protein.	Uncharacterized protein.	0.648
C3XXN0_BRAFL	C3YAW6_BRAFL	C3XXN0	C3YAW6	RING-type domain-containing protein.	F-box domain-containing protein.	0.558
C3XXN0_BRAFL	C3YCM0_BRAFL	C3XXN0	C3YCM0	RING-type domain-containing protein.	F-box domain-containing protein.	0.463
C3XXN0_BRAFL	C3YDV7_BRAFL	C3XXN0	C3YDV7	RING-type domain-containing protein.	Uncharacterized protein.	0.745
C3XXN0_BRAFL	C3YLM6_BRAFL	C3XXN0	C3YLM6	RING-type domain-containing protein.	F-box domain-containing protein.	0.629
C3XXN0_BRAFL	C3YM20_BRAFL	C3XXN0	C3YM20	RING-type domain-containing protein.	F-box domain-containing protein.	0.989
C3XXN0_BRAFL	C3YNN9_BRAFL	C3XXN0	C3YNN9	RING-type domain-containing protein.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.437
C3XXN0_BRAFL	C3YWA4_BRAFL	C3XXN0	C3YWA4	RING-type domain-containing protein.	F-box domain-containing protein.	0.455