(7 nodes) Mre11 complex network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YFG1_BRAFL	FHA domain-containing protein. (721 aa)
	C3ZV28_BRAFL	Uncharacterized protein. (383 aa)
	C3ZMX5_BRAFL	Uncharacterized protein. (1057 aa)
	C3ZEN4_BRAFL	Mre11_DNA_bind domain-containing protein. (441 aa)
	C3YWA5_BRAFL	AAA_23 domain-containing protein. (187 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3YFG1_BRAFL	C3YH71_BRAFL	C3YFG1	C3YH71	FHA domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.969
C3YFG1_BRAFL	C3YH73_BRAFL	C3YFG1	C3YH73	FHA domain-containing protein.	FAT domain-containing protein.	0.969
C3YFG1_BRAFL	C3YWA5_BRAFL	C3YFG1	C3YWA5	FHA domain-containing protein.	AAA_23 domain-containing protein.	0.995
C3YFG1_BRAFL	C3ZEN4_BRAFL	C3YFG1	C3ZEN4	FHA domain-containing protein.	Mre11_DNA_bind domain-containing protein.	0.999
C3YFG1_BRAFL	C3ZMX5_BRAFL	C3YFG1	C3ZMX5	FHA domain-containing protein.	Uncharacterized protein.	0.985
C3YFG1_BRAFL	C3ZV28_BRAFL	C3YFG1	C3ZV28	FHA domain-containing protein.	Uncharacterized protein.	0.812
C3YH71_BRAFL	C3YFG1_BRAFL	C3YH71	C3YFG1	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FHA domain-containing protein.	0.969
C3YH71_BRAFL	C3YH73_BRAFL	C3YH71	C3YH73	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FAT domain-containing protein.	0.948
C3YH71_BRAFL	C3YWA5_BRAFL	C3YH71	C3YWA5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	AAA_23 domain-containing protein.	0.958
C3YH71_BRAFL	C3ZEN4_BRAFL	C3YH71	C3ZEN4	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Mre11_DNA_bind domain-containing protein.	0.971
C3YH71_BRAFL	C3ZMX5_BRAFL	C3YH71	C3ZMX5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.758
C3YH71_BRAFL	C3ZV28_BRAFL	C3YH71	C3ZV28	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.875
C3YH73_BRAFL	C3YFG1_BRAFL	C3YH73	C3YFG1	FAT domain-containing protein.	FHA domain-containing protein.	0.969
C3YH73_BRAFL	C3YH71_BRAFL	C3YH73	C3YH71	FAT domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.948
C3YH73_BRAFL	C3YWA5_BRAFL	C3YH73	C3YWA5	FAT domain-containing protein.	AAA_23 domain-containing protein.	0.958
C3YH73_BRAFL	C3ZEN4_BRAFL	C3YH73	C3ZEN4	FAT domain-containing protein.	Mre11_DNA_bind domain-containing protein.	0.971
C3YH73_BRAFL	C3ZMX5_BRAFL	C3YH73	C3ZMX5	FAT domain-containing protein.	Uncharacterized protein.	0.758
C3YH73_BRAFL	C3ZV28_BRAFL	C3YH73	C3ZV28	FAT domain-containing protein.	Uncharacterized protein.	0.875
C3YWA5_BRAFL	C3YFG1_BRAFL	C3YWA5	C3YFG1	AAA_23 domain-containing protein.	FHA domain-containing protein.	0.995
C3YWA5_BRAFL	C3YH71_BRAFL	C3YWA5	C3YH71	AAA_23 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.958