(80 nodes) Side of membrane network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XUF6_BRAFL	Folate_rec domain-containing protein. (190 aa)
	C3ZY47_BRAFL	C-type lectin domain-containing protein. (128 aa)
	C3ZX86_BRAFL	C-type lectin domain-containing protein. (128 aa)
	C3ZX75_BRAFL	C-type lectin domain-containing protein. (142 aa)
	C3ZX74_BRAFL	C-type lectin domain-containing protein. (142 aa)
	C3ZSF0_BRAFL	WD_REPEATS_REGION domain-containing protein. (341 aa)
	C3ZSA7_BRAFL	WD_REPEATS_REGION domain-containing protein. (434 aa)
	C3ZR51_BRAFL	Uncharacterized protein. (312 aa)
	C3ZNY9_BRAFL	C-type lectin domain-containing protein. (134 aa)
	C3ZNW3_BRAFL	C-type lectin domain-containing protein. (143 aa)
	C3ZN22_BRAFL	Uncharacterized protein. (56 aa)
	C3ZLV9_BRAFL	Uncharacterized protein. (394 aa)
	C3ZLM6_BRAFL	DUF2428 domain-containing protein. (1823 aa)
	C3ZLD5_BRAFL	Uncharacterized protein. (2668 aa)
	C3ZKL9_BRAFL	FERM domain-containing protein. (552 aa)
	C3ZKL8_BRAFL	FERM domain-containing protein. (345 aa)
	C3ZI65_BRAFL	LITAF domain-containing protein. (109 aa)
	C3ZFI6_BRAFL	PA domain-containing protein. (624 aa)
	C3ZFH1_BRAFL	C-type lectin domain-containing protein. (365 aa)
	C3ZF12_BRAFL	Uncharacterized protein. (907 aa)
	C3ZE63_BRAFL	CBM20 domain-containing protein. (316 aa)
	C3ZDL9_BRAFL	C-type lectin domain-containing protein. (123 aa)
	C3ZCX1_BRAFL	LITAF domain-containing protein. (71 aa)
	C3ZCX0_BRAFL	LITAF domain-containing protein. (72 aa)
	C3ZAI1_BRAFL	Uncharacterized protein. (181 aa)
	C3ZAI0_BRAFL	Uncharacterized protein. (206 aa)
	C3ZAH8_BRAFL	Uncharacterized protein. (2208 aa)
	C3XSA1_BRAFL	Folate_rec domain-containing protein. (278 aa)
	C3XSM6_BRAFL	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (347 aa)
	C3XTR5_BRAFL	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (346 aa)
	C3XTR6_BRAFL	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (345 aa)
	C3ZY58_BRAFL	C-type lectin domain-containing protein. (127 aa)
	C3XUK6_BRAFL	C-type lectin domain-containing protein. (127 aa)
	C3XV76_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (769 aa)
	C3XY80_BRAFL	Gi alpha subunit. (354 aa)
	C3XZA4_BRAFL	C-type lectin domain-containing protein. (137 aa)
	C3Y0B9_BRAFL	Uncharacterized protein. (229 aa)
	C3Y181_BRAFL	Folate_rec domain-containing protein. (242 aa)
	C3Y187_BRAFL	Uncharacterized protein. (367 aa)
	C3Y1A9_BRAFL	Uncharacterized protein. (1671 aa)
	C3Y1Z3_BRAFL	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (367 aa)
	C3Y5Z3_BRAFL	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (326 aa)
	C3Y7G0_BRAFL	C-type lectin domain-containing protein. (138 aa)
	C3Y7G4_BRAFL	Uncharacterized protein. (160 aa)
	C3Y7G6_BRAFL	Uncharacterized protein. (184 aa)
	C3YEG6_BRAFL	Uncharacterized protein. (367 aa)
	C3YF31_BRAFL	Folate_rec domain-containing protein. (222 aa)
	C3YFC1_BRAFL	Uncharacterized protein. (249 aa)
	C3YH17_BRAFL	C-type lectin domain-containing protein. (132 aa)
	C3YLB9_BRAFL	IMD domain-containing protein. (71 aa)
	C3YLC0_BRAFL	Uncharacterized protein. (765 aa)
	C3YPI7_BRAFL	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (305 aa)
	C3YQ23_BRAFL	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (352 aa)
	C3YQ24_BRAFL	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (353 aa)
	C3YQ92_BRAFL	WD_REPEATS_REGION domain-containing protein. (247 aa)
	C3YQA4_BRAFL	WD_REPEATS_REGION domain-containing protein. (355 aa)
	C3YQG3_BRAFL	C-type lectin domain-containing protein. (127 aa)
	C3YRH8_BRAFL	Uncharacterized protein. (191 aa)
	C3YWE4_BRAFL	Uncharacterized protein. (307 aa)
	C3YWY5_BRAFL	C-type lectin domain-containing protein. (150 aa)
	C3YX07_BRAFL	Folate_rec domain-containing protein. (249 aa)
	C3YX09_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (707 aa)
	C3YX57_BRAFL	C-type lectin domain-containing protein. (142 aa)
	C3YX69_BRAFL	BSD domain-containing protein. (263 aa)
	C3YZ33_BRAFL	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (145 aa)
	C3YZN7_BRAFL	Folate_rec domain-containing protein. (203 aa)
	C3Z0T0_BRAFL	Uncharacterized protein. (111 aa)
	C3Z2D3_BRAFL	Uncharacterized protein. (1856 aa)
	C3Z4L2_BRAFL	LITAF domain-containing protein. (127 aa)
	C3Z4T1_BRAFL	Uncharacterized protein. (142 aa)
	C3Z4W7_BRAFL	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (398 aa)
	C3Z5S0_BRAFL	Folate_rec domain-containing protein. (265 aa)
	C3Z5S2_BRAFL	Uncharacterized protein. (363 aa)
	C3Z6Y6_BRAFL	Uncharacterized protein. (266 aa)
	C3Z7R5_BRAFL	Folate_rec domain-containing protein. (227 aa)
	C3Z917_BRAFL	Protein kinase domain-containing protein. (450 aa)
	C4A120_BRAFL	C-type lectin domain-containing protein. (265 aa)
	C3ZYM1_BRAFL	C-type lectin domain-containing protein. (146 aa)
	C3ZYE2_BRAFL	Uncharacterized protein. (174 aa)
	C3ZYD0_BRAFL	SUEL-type lectin domain-containing protein. (92 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XSM6_BRAFL	C3YQ24_BRAFL	C3XSM6	C3YQ24	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.903
C3XY80_BRAFL	C3YEG6_BRAFL	C3XY80	C3YEG6	Gi alpha subunit.	Uncharacterized protein.	0.723
C3XY80_BRAFL	C3YFC1_BRAFL	C3XY80	C3YFC1	Gi alpha subunit.	Uncharacterized protein.	0.545
C3XY80_BRAFL	C3YQ92_BRAFL	C3XY80	C3YQ92	Gi alpha subunit.	WD_REPEATS_REGION domain-containing protein.	0.862
C3XY80_BRAFL	C3YQA4_BRAFL	C3XY80	C3YQA4	Gi alpha subunit.	WD_REPEATS_REGION domain-containing protein.	0.862
C3XY80_BRAFL	C3YWE4_BRAFL	C3XY80	C3YWE4	Gi alpha subunit.	Uncharacterized protein.	0.556
C3XY80_BRAFL	C3Z0T0_BRAFL	C3XY80	C3Z0T0	Gi alpha subunit.	Uncharacterized protein.	0.603
C3XY80_BRAFL	C3Z6Y6_BRAFL	C3XY80	C3Z6Y6	Gi alpha subunit.	Uncharacterized protein.	0.597
C3XY80_BRAFL	C3ZSA7_BRAFL	C3XY80	C3ZSA7	Gi alpha subunit.	WD_REPEATS_REGION domain-containing protein.	0.862
C3XY80_BRAFL	C3ZSF0_BRAFL	C3XY80	C3ZSF0	Gi alpha subunit.	WD_REPEATS_REGION domain-containing protein.	0.974
C3XY80_BRAFL	C3ZYD0_BRAFL	C3XY80	C3ZYD0	Gi alpha subunit.	SUEL-type lectin domain-containing protein.	0.643
C3XY80_BRAFL	C3ZYE2_BRAFL	C3XY80	C3ZYE2	Gi alpha subunit.	Uncharacterized protein.	0.721
C3Y7G4_BRAFL	C3Y7G6_BRAFL	C3Y7G4	C3Y7G6	Uncharacterized protein.	Uncharacterized protein.	0.543
C3Y7G6_BRAFL	C3Y7G4_BRAFL	C3Y7G6	C3Y7G4	Uncharacterized protein.	Uncharacterized protein.	0.543
C3YEG6_BRAFL	C3XY80_BRAFL	C3YEG6	C3XY80	Uncharacterized protein.	Gi alpha subunit.	0.723
C3YEG6_BRAFL	C3YFC1_BRAFL	C3YEG6	C3YFC1	Uncharacterized protein.	Uncharacterized protein.	0.724
C3YEG6_BRAFL	C3YQ92_BRAFL	C3YEG6	C3YQ92	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.857
C3YEG6_BRAFL	C3YQA4_BRAFL	C3YEG6	C3YQA4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.857
C3YEG6_BRAFL	C3YWE4_BRAFL	C3YEG6	C3YWE4	Uncharacterized protein.	Uncharacterized protein.	0.721
C3YEG6_BRAFL	C3Z0T0_BRAFL	C3YEG6	C3Z0T0	Uncharacterized protein.	Uncharacterized protein.	0.615