(7 nodes) BORC complex network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y271_BRAFL	RRM domain-containing protein. (513 aa)
	C3Y7G4_BRAFL	Uncharacterized protein. (160 aa)
	C3Y7G6_BRAFL	Uncharacterized protein. (184 aa)
	C3YPL5_BRAFL	Uncharacterized protein. (118 aa)
	C3YTN9_BRAFL	Uncharacterized protein. (128 aa)
	C3Z6C2_BRAFL	Uncharacterized protein. (90 aa)
	C3ZWH1_BRAFL	Uncharacterized protein. (99 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y271_BRAFL	C3Y7G4_BRAFL	C3Y271	C3Y7G4	RRM domain-containing protein.	Uncharacterized protein.	0.540
C3Y271_BRAFL	C3Y7G6_BRAFL	C3Y271	C3Y7G6	RRM domain-containing protein.	Uncharacterized protein.	0.540
C3Y271_BRAFL	C3YPL5_BRAFL	C3Y271	C3YPL5	RRM domain-containing protein.	Uncharacterized protein.	0.540
C3Y271_BRAFL	C3YTN9_BRAFL	C3Y271	C3YTN9	RRM domain-containing protein.	Uncharacterized protein.	0.540
C3Y271_BRAFL	C3Z6C2_BRAFL	C3Y271	C3Z6C2	RRM domain-containing protein.	Uncharacterized protein.	0.541
C3Y271_BRAFL	C3ZWH1_BRAFL	C3Y271	C3ZWH1	RRM domain-containing protein.	Uncharacterized protein.	0.540
C3Y7G4_BRAFL	C3Y271_BRAFL	C3Y7G4	C3Y271	Uncharacterized protein.	RRM domain-containing protein.	0.540
C3Y7G4_BRAFL	C3Y7G6_BRAFL	C3Y7G4	C3Y7G6	Uncharacterized protein.	Uncharacterized protein.	0.543
C3Y7G4_BRAFL	C3YPL5_BRAFL	C3Y7G4	C3YPL5	Uncharacterized protein.	Uncharacterized protein.	0.796
C3Y7G4_BRAFL	C3YTN9_BRAFL	C3Y7G4	C3YTN9	Uncharacterized protein.	Uncharacterized protein.	0.787
C3Y7G4_BRAFL	C3Z6C2_BRAFL	C3Y7G4	C3Z6C2	Uncharacterized protein.	Uncharacterized protein.	0.771
C3Y7G4_BRAFL	C3ZWH1_BRAFL	C3Y7G4	C3ZWH1	Uncharacterized protein.	Uncharacterized protein.	0.752
C3Y7G6_BRAFL	C3Y271_BRAFL	C3Y7G6	C3Y271	Uncharacterized protein.	RRM domain-containing protein.	0.540
C3Y7G6_BRAFL	C3Y7G4_BRAFL	C3Y7G6	C3Y7G4	Uncharacterized protein.	Uncharacterized protein.	0.543
C3Y7G6_BRAFL	C3YPL5_BRAFL	C3Y7G6	C3YPL5	Uncharacterized protein.	Uncharacterized protein.	0.796
C3Y7G6_BRAFL	C3YTN9_BRAFL	C3Y7G6	C3YTN9	Uncharacterized protein.	Uncharacterized protein.	0.787
C3Y7G6_BRAFL	C3Z6C2_BRAFL	C3Y7G6	C3Z6C2	Uncharacterized protein.	Uncharacterized protein.	0.771
C3Y7G6_BRAFL	C3ZWH1_BRAFL	C3Y7G6	C3ZWH1	Uncharacterized protein.	Uncharacterized protein.	0.752
C3YPL5_BRAFL	C3Y271_BRAFL	C3YPL5	C3Y271	Uncharacterized protein.	RRM domain-containing protein.	0.540
C3YPL5_BRAFL	C3Y7G4_BRAFL	C3YPL5	C3Y7G4	Uncharacterized protein.	Uncharacterized protein.	0.796