STRINGSTRING
C3XXY6_BRAFL C3XXY6_BRAFL C3ZKZ4_BRAFL C3ZKZ4_BRAFL C3ZBI1_BRAFL C3ZBI1_BRAFL C3Z8B3_BRAFL C3Z8B3_BRAFL C3Z0B1_BRAFL C3Z0B1_BRAFL C3YQB9_BRAFL C3YQB9_BRAFL C3YJQ0_BRAFL C3YJQ0_BRAFL C3Y293_BRAFL C3Y293_BRAFL C3XZW8_BRAFL C3XZW8_BRAFL C3XZD8_BRAFL C3XZD8_BRAFL MYSM1 MYSM1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XXY6_BRAFLMPN domain-containing protein. (311 aa)
C3ZKZ4_BRAFLMPN domain-containing protein. (322 aa)
C3ZBI1_BRAFLMPN domain-containing protein. (337 aa)
C3Z8B3_BRAFLMPN domain-containing protein. (298 aa)
C3Z0B1_BRAFLMPN domain-containing protein. (432 aa)
C3YQB9_BRAFLEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (331 aa)
C3YJQ0_BRAFLMPN domain-containing protein. (268 aa)
C3Y293_BRAFLMPN domain-containing protein. (168 aa)
C3XZW8_BRAFLMPN domain-containing protein. (393 aa)
C3XZD8_BRAFLEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (277 aa)
MYSM1Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation (By similarity). (809 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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