STRINGSTRING
C3XU40_BRAFL C3XU40_BRAFL C3XVY8_BRAFL C3XVY8_BRAFL C3Y170_BRAFL C3Y170_BRAFL C3Y8E6_BRAFL C3Y8E6_BRAFL C3YEQ2_BRAFL C3YEQ2_BRAFL C3YPM1_BRAFL C3YPM1_BRAFL C3YWQ1_BRAFL C3YWQ1_BRAFL C3YZI6_BRAFL C3YZI6_BRAFL C3Z502_BRAFL C3Z502_BRAFL C3ZAG0_BRAFL C3ZAG0_BRAFL C3ZFM7_BRAFL C3ZFM7_BRAFL C3ZGQ7_BRAFL C3ZGQ7_BRAFL C3ZZS2_BRAFL C3ZZS2_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XU40_BRAFLUncharacterized protein. (2155 aa)
C3XVY8_BRAFLE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (414 aa)
C3Y170_BRAFLRBR-type E3 ubiquitin transferase. (299 aa)
C3Y8E6_BRAFLRING-type domain-containing protein. (586 aa)
C3YEQ2_BRAFLRBR-type E3 ubiquitin transferase. (728 aa)
C3YPM1_BRAFLRBR-type E3 ubiquitin transferase. (389 aa)
C3YWQ1_BRAFLUncharacterized protein. (915 aa)
C3YZI6_BRAFLRBR-type E3 ubiquitin transferase. (397 aa)
C3Z502_BRAFLE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (434 aa)
C3ZAG0_BRAFLRBR-type E3 ubiquitin transferase. (224 aa)
C3ZFM7_BRAFLRBR-type E3 ubiquitin transferase. (366 aa)
C3ZGQ7_BRAFLRBR-type E3 ubiquitin transferase. (486 aa)
C3ZZS2_BRAFLRBR-type E3 ubiquitin transferase. (214 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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