(10 nodes) SNARE network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YH01_BRAFL	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (331 aa)
	C3ZCU7_BRAFL	Uncharacterized protein. (1314 aa)
	C3ZCV0_BRAFL	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (253 aa)
	C3ZG74_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (232 aa)
	C3XVK7_BRAFL	Uncharacterized protein. (114 aa)
	C3XVK8_BRAFL	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (210 aa)
	C3XZI6_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (239 aa)
	C3YHW5_BRAFL	Uncharacterized protein. (222 aa)
	C3Z5P8_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (196 aa)
	C3ZAU4_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (318 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XVK7_BRAFL	C3YH01_BRAFL	C3XVK7	C3YH01	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.788
C3XVK7_BRAFL	C3ZAU4_BRAFL	C3XVK7	C3ZAU4	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.650
C3XVK7_BRAFL	C3ZCV0_BRAFL	C3XVK7	C3ZCV0	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.614
C3XVK7_BRAFL	C3ZG74_BRAFL	C3XVK7	C3ZG74	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.595
C3XVK8_BRAFL	C3XZI6_BRAFL	C3XVK8	C3XZI6	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.636
C3XVK8_BRAFL	C3YH01_BRAFL	C3XVK8	C3YH01	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.898
C3XVK8_BRAFL	C3Z5P8_BRAFL	C3XVK8	C3Z5P8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.688
C3XVK8_BRAFL	C3ZAU4_BRAFL	C3XVK8	C3ZAU4	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.832
C3XVK8_BRAFL	C3ZCV0_BRAFL	C3XVK8	C3ZCV0	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.815
C3XVK8_BRAFL	C3ZG74_BRAFL	C3XVK8	C3ZG74	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.806
C3XZI6_BRAFL	C3XVK8_BRAFL	C3XZI6	C3XVK8	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.636
C3XZI6_BRAFL	C3YH01_BRAFL	C3XZI6	C3YH01	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.972
C3XZI6_BRAFL	C3Z5P8_BRAFL	C3XZI6	C3Z5P8	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.954
C3XZI6_BRAFL	C3ZAU4_BRAFL	C3XZI6	C3ZAU4	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.986
C3XZI6_BRAFL	C3ZCV0_BRAFL	C3XZI6	C3ZCV0	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.944
C3XZI6_BRAFL	C3ZG74_BRAFL	C3XZI6	C3ZG74	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.983
C3YH01_BRAFL	C3XVK7_BRAFL	C3YH01	C3XVK7	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Uncharacterized protein.	0.788
C3YH01_BRAFL	C3XVK8_BRAFL	C3YH01	C3XVK8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.898
C3YH01_BRAFL	C3XZI6_BRAFL	C3YH01	C3XZI6	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.972
C3YH01_BRAFL	C3Z5P8_BRAFL	C3YH01	C3Z5P8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.998