(30 nodes) HECT, E3 ligase catalytic domain network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YFD0_BRAFL	Uncharacterized protein. (574 aa)
	C3YLJ2_BRAFL	HECT domain-containing protein. (1535 aa)
	C3YNW4_BRAFL	Uncharacterized protein. (3971 aa)
	C3YNW5_BRAFL	HECT domain-containing protein. (113 aa)
	C3XXA5_BRAFL	HECT domain-containing protein. (1187 aa)
	C3YCK7_BRAFL	HECT domain-containing protein. (344 aa)
	C3YCK6_BRAFL	HECT domain-containing protein. (1069 aa)
	C3YBH9_BRAFL	HECT domain-containing protein. (988 aa)
	C3YBE1_BRAFL	Uncharacterized protein. (502 aa)
	C3Y954_BRAFL	HECT domain-containing protein. (1086 aa)
	C3Y700_BRAFL	HECT domain-containing protein. (503 aa)
	C3Y6Z9_BRAFL	HECT domain-containing protein. (269 aa)
	C3XXN1_BRAFL	HECT domain-containing protein. (1032 aa)
	C3Y6Z2_BRAFL	HECT domain-containing protein. (467 aa)
	C3Y6Z1_BRAFL	HECT domain-containing protein. (121 aa)
	C3Y6Z0_BRAFL	HECT domain-containing protein. (161 aa)
	C3XY11_BRAFL	Uncharacterized protein. (846 aa)
	C3Y5X6_BRAFL	Uncharacterized protein. (681 aa)
	C3YK34_BRAFL	Uncharacterized protein. (2326 aa)
	C3YY09_BRAFL	Uncharacterized protein. (939 aa)
	C3Z5C5_BRAFL	HECT domain-containing protein. (1015 aa)
	C3Z7U6_BRAFL	HECT domain-containing protein. (341 aa)
	C3ZL75_BRAFL	HECT domain-containing protein. (4443 aa)
	C3ZMD7_BRAFL	HECT domain-containing protein. (567 aa)
	C3ZQ26_BRAFL	HECT domain-containing protein. (1622 aa)
	C3ZS25_BRAFL	Uncharacterized protein. (2721 aa)
	C3ZX97_BRAFL	HECT domain-containing protein. (599 aa)
	C3ZXF9_BRAFL	HECT domain-containing protein. (780 aa)
	C4A113_BRAFL	HECT domain-containing protein. (384 aa)
	C3YY01_BRAFL	HECT domain-containing protein. (126 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XXN1_BRAFL	C3YK34_BRAFL	C3XXN1	C3YK34	HECT domain-containing protein.	Uncharacterized protein.	0.558
C3XY11_BRAFL	C3YK34_BRAFL	C3XY11	C3YK34	Uncharacterized protein.	Uncharacterized protein.	0.693
C3Y6Z0_BRAFL	C3Y6Z2_BRAFL	C3Y6Z0	C3Y6Z2	HECT domain-containing protein.	HECT domain-containing protein.	0.923
C3Y6Z0_BRAFL	C3Y700_BRAFL	C3Y6Z0	C3Y700	HECT domain-containing protein.	HECT domain-containing protein.	0.922
C3Y6Z0_BRAFL	C3YK34_BRAFL	C3Y6Z0	C3YK34	HECT domain-containing protein.	Uncharacterized protein.	0.544
C3Y6Z1_BRAFL	C3YK34_BRAFL	C3Y6Z1	C3YK34	HECT domain-containing protein.	Uncharacterized protein.	0.544
C3Y6Z2_BRAFL	C3Y6Z0_BRAFL	C3Y6Z2	C3Y6Z0	HECT domain-containing protein.	HECT domain-containing protein.	0.923
C3Y6Z2_BRAFL	C3Y6Z9_BRAFL	C3Y6Z2	C3Y6Z9	HECT domain-containing protein.	HECT domain-containing protein.	0.909
C3Y6Z2_BRAFL	C3YK34_BRAFL	C3Y6Z2	C3YK34	HECT domain-containing protein.	Uncharacterized protein.	0.544
C3Y6Z9_BRAFL	C3Y6Z2_BRAFL	C3Y6Z9	C3Y6Z2	HECT domain-containing protein.	HECT domain-containing protein.	0.909
C3Y6Z9_BRAFL	C3Y700_BRAFL	C3Y6Z9	C3Y700	HECT domain-containing protein.	HECT domain-containing protein.	0.932
C3Y6Z9_BRAFL	C3YK34_BRAFL	C3Y6Z9	C3YK34	HECT domain-containing protein.	Uncharacterized protein.	0.544
C3Y700_BRAFL	C3Y6Z0_BRAFL	C3Y700	C3Y6Z0	HECT domain-containing protein.	HECT domain-containing protein.	0.922
C3Y700_BRAFL	C3Y6Z9_BRAFL	C3Y700	C3Y6Z9	HECT domain-containing protein.	HECT domain-containing protein.	0.932
C3Y700_BRAFL	C3YK34_BRAFL	C3Y700	C3YK34	HECT domain-containing protein.	Uncharacterized protein.	0.544
C3Y954_BRAFL	C3YK34_BRAFL	C3Y954	C3YK34	HECT domain-containing protein.	Uncharacterized protein.	0.793
C3YBE1_BRAFL	C3Z7U6_BRAFL	C3YBE1	C3Z7U6	Uncharacterized protein.	HECT domain-containing protein.	0.918
C3YCK6_BRAFL	C3YK34_BRAFL	C3YCK6	C3YK34	HECT domain-containing protein.	Uncharacterized protein.	0.871
C3YCK7_BRAFL	C3YK34_BRAFL	C3YCK7	C3YK34	HECT domain-containing protein.	Uncharacterized protein.	0.871
C3YK34_BRAFL	C3XXN1_BRAFL	C3YK34	C3XXN1	Uncharacterized protein.	HECT domain-containing protein.	0.558