(34 nodes) SH2 domain superfamily network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y8I0_BRAFL	SH2 domain-containing protein. (101 aa)
	C3YA44_BRAFL	Uncharacterized protein. (1022 aa)
	C3YBQ0_BRAFL	Uncharacterized protein. (647 aa)
	C3YCZ8_BRAFL	Uncharacterized protein. (496 aa)
	C3YD45_BRAFL	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1823 aa)
	C3YET2_BRAFL	SH2 domain-containing protein. (301 aa)
	C3YGN7_BRAFL	Uncharacterized protein. (193 aa)
	C3YM24_BRAFL	Uncharacterized protein. (190 aa)
	C3YNG0_BRAFL	WW domain-containing protein. (276 aa)
	C3YQJ2_BRAFL	SH2 domain-containing protein. (453 aa)
	C3YUH5_BRAFL	Uncharacterized protein. (302 aa)
	C3YW40_BRAFL	Uncharacterized protein. (756 aa)
	C3YYE3_BRAFL	Uncharacterized protein. (1043 aa)
	C3Z699_BRAFL	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (950 aa)
	C3Z8E4_BRAFL	SH2 domain-containing protein. (305 aa)
	C3Z8E7_BRAFL	SH2 domain-containing protein. (496 aa)
	C3ZBA3_BRAFL	Signal transducer and activator of transcription. (849 aa)
	C3ZG97_BRAFL	Non-specific protein-tyrosine kinase. (1558 aa)
	C3ZGU2_BRAFL	Uncharacterized protein. (865 aa)
	C3ZIU9_BRAFL	Uncharacterized protein. (444 aa)
	C3ZM27_BRAFL	Uncharacterized protein. (170 aa)
	C3ZPI6_BRAFL	Non-specific protein-tyrosine kinase. (718 aa)
	C3XQH8_BRAFL	PH domain-containing protein. (206 aa)
	C3XTW6_BRAFL	Uncharacterized protein. (181 aa)
	C3XTW8_BRAFL	SH2 domain-containing protein. (120 aa)
	C3XVZ8_BRAFL	Uncharacterized protein. (187 aa)
	C3XWJ1_BRAFL	Uncharacterized protein. (181 aa)
	C3XYL7_BRAFL	Uncharacterized protein. (296 aa)
	C3XYL9_BRAFL	SH2 domain-containing protein. (151 aa)
	C3Y0Y7_BRAFL	Cbl-PTB domain-containing protein. (233 aa)
	C3ZKS6_BRAFL	Non-specific protein-tyrosine kinase. (677 aa)
	C3Y494_BRAFL	Uncharacterized protein. (588 aa)
	C3Y4J7_BRAFL	Uncharacterized protein. (442 aa)
	C3Y564_BRAFL	Uncharacterized protein. (178 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQH8_BRAFL	C3Y8I0_BRAFL	C3XQH8	C3Y8I0	PH domain-containing protein.	SH2 domain-containing protein.	0.650
C3XTW6_BRAFL	C3XTW8_BRAFL	C3XTW6	C3XTW8	Uncharacterized protein.	SH2 domain-containing protein.	0.543
C3XTW6_BRAFL	C3XWJ1_BRAFL	C3XTW6	C3XWJ1	Uncharacterized protein.	Uncharacterized protein.	0.557
C3XTW6_BRAFL	C3YA44_BRAFL	C3XTW6	C3YA44	Uncharacterized protein.	Uncharacterized protein.	0.552
C3XTW6_BRAFL	C3YCZ8_BRAFL	C3XTW6	C3YCZ8	Uncharacterized protein.	Uncharacterized protein.	0.645
C3XTW6_BRAFL	C3YGN7_BRAFL	C3XTW6	C3YGN7	Uncharacterized protein.	Uncharacterized protein.	0.706
C3XTW6_BRAFL	C3YM24_BRAFL	C3XTW6	C3YM24	Uncharacterized protein.	Uncharacterized protein.	0.553
C3XTW6_BRAFL	C3YYE3_BRAFL	C3XTW6	C3YYE3	Uncharacterized protein.	Uncharacterized protein.	0.558
C3XTW6_BRAFL	C3ZM27_BRAFL	C3XTW6	C3ZM27	Uncharacterized protein.	Uncharacterized protein.	0.551
C3XTW8_BRAFL	C3XTW6_BRAFL	C3XTW8	C3XTW6	SH2 domain-containing protein.	Uncharacterized protein.	0.543
C3XTW8_BRAFL	C3XWJ1_BRAFL	C3XTW8	C3XWJ1	SH2 domain-containing protein.	Uncharacterized protein.	0.560
C3XTW8_BRAFL	C3YA44_BRAFL	C3XTW8	C3YA44	SH2 domain-containing protein.	Uncharacterized protein.	0.549
C3XTW8_BRAFL	C3YCZ8_BRAFL	C3XTW8	C3YCZ8	SH2 domain-containing protein.	Uncharacterized protein.	0.540
C3XTW8_BRAFL	C3YGN7_BRAFL	C3XTW8	C3YGN7	SH2 domain-containing protein.	Uncharacterized protein.	0.636
C3XTW8_BRAFL	C3YM24_BRAFL	C3XTW8	C3YM24	SH2 domain-containing protein.	Uncharacterized protein.	0.556
C3XTW8_BRAFL	C3YYE3_BRAFL	C3XTW8	C3YYE3	SH2 domain-containing protein.	Uncharacterized protein.	0.540
C3XTW8_BRAFL	C3ZM27_BRAFL	C3XTW8	C3ZM27	SH2 domain-containing protein.	Uncharacterized protein.	0.555
C3XWJ1_BRAFL	C3XTW6_BRAFL	C3XWJ1	C3XTW6	Uncharacterized protein.	Uncharacterized protein.	0.557
C3XWJ1_BRAFL	C3XTW8_BRAFL	C3XWJ1	C3XTW8	Uncharacterized protein.	SH2 domain-containing protein.	0.560
C3XWJ1_BRAFL	C3YA44_BRAFL	C3XWJ1	C3YA44	Uncharacterized protein.	Uncharacterized protein.	0.549