(42 nodes) CH domain superfamily network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YXT3_BRAFL	Calponin-homology (CH) domain-containing protein. (1747 aa)
	C3ZSH7_BRAFL	Calponin-homology (CH) domain-containing protein. (1021 aa)
	C3ZQC3_BRAFL	Uncharacterized protein. (1892 aa)
	C3ZQA4_BRAFL	Spectrin beta chain; Belongs to the spectrin family. (2039 aa)
	C3ZQA3_BRAFL	Calponin-homology (CH) domain-containing protein. (154 aa)
	C3ZPQ3_BRAFL	Uncharacterized protein. (362 aa)
	C3ZLA0_BRAFL	Calponin-homology (CH) domain-containing protein. (3272 aa)
	C3ZHZ0_BRAFL	Uncharacterized protein. (2872 aa)
	C3ZHT7_BRAFL	Uncharacterized protein. (307 aa)
	C3ZHT4_BRAFL	Calponin-homology (CH) domain-containing protein. (241 aa)
	C3ZFS7_BRAFL	Uncharacterized protein. (3563 aa)
	C3ZFA6_BRAFL	Calponin-homology (CH) domain-containing protein. (146 aa)
	C3Z447_BRAFL	Uncharacterized protein. (257 aa)
	C3Z445_BRAFL	Calponin-homology (CH) domain-containing protein. (115 aa)
	C3YY30_BRAFL	Uncharacterized protein. (538 aa)
	C3YXU7_BRAFL	Transgelin; Belongs to the calponin family. (234 aa)
	C3YWG1_BRAFL	Calponin-homology (CH) domain-containing protein. (50 aa)
	C3YWG0_BRAFL	Calponin-homology (CH) domain-containing protein. (143 aa)
	C3YVJ4_BRAFL	Calponin-homology (CH) domain-containing protein. (169 aa)
	C3YQR6_BRAFL	Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (187 aa)
	C3YQ64_BRAFL	Calponin-homology (CH) domain-containing protein. (368 aa)
	C3YJ05_BRAFL	Calponin-homology (CH) domain-containing protein. (229 aa)
	C3YIE4_BRAFL	Calponin-homology (CH) domain-containing protein. (502 aa)
	C3YDR3_BRAFL	Calponin-homology (CH) domain-containing protein. (2124 aa)
	C3YBI8_BRAFL	Calponin-homology (CH) domain-containing protein. (581 aa)
	C3YBC6_BRAFL	Uncharacterized protein. (118 aa)
	C3YBC4_BRAFL	Uncharacterized protein. (7064 aa)
	C3YB36_BRAFL	Uncharacterized protein. (475 aa)
	C3Y7V5_BRAFL	Uncharacterized protein. (3338 aa)
	C3Y2N2_BRAFL	Uncharacterized protein. (718 aa)
	C3Y2E9_BRAFL	Calponin-homology (CH) domain-containing protein. (59 aa)
	C3Y1X9_BRAFL	EB1 C-terminal domain-containing protein. (226 aa)
	C3Y1X8_BRAFL	Uncharacterized protein. (307 aa)
	C3Y0N1_BRAFL	Uncharacterized protein. (5098 aa)
	C3XZB6_BRAFL	Uncharacterized protein. (1043 aa)
	C3XZ42_BRAFL	Uncharacterized protein. (893 aa)
	C3XXJ6_BRAFL	Uncharacterized protein. (1709 aa)
	C3XWG1_BRAFL	ANK_REP_REGION domain-containing protein. (925 aa)
	C3XWE5_BRAFL	Calponin-homology (CH) domain-containing protein. (473 aa)
	C3XRB2_BRAFL	Uncharacterized protein. (8372 aa)
	C3XQZ8_BRAFL	Spectrin beta chain; Belongs to the spectrin family. (2357 aa)
	HOOK_BRAFL	Protein Hook homolog; May function to promote vesicle trafficking and/or fusion. May act to link a number of membrane-bound organelles to the cytoskeleton (By similarity). (723 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XZ42_BRAFL	C3YQR6_BRAFL	C3XZ42	C3YQR6	Uncharacterized protein.	Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity.	0.433
C3XZ42_BRAFL	C3YXT3_BRAFL	C3XZ42	C3YXT3	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.500
C3XZ42_BRAFL	C3YXU7_BRAFL	C3XZ42	C3YXU7	Uncharacterized protein.	Transgelin; Belongs to the calponin family.	0.433
C3XZ42_BRAFL	C3ZPQ3_BRAFL	C3XZ42	C3ZPQ3	Uncharacterized protein.	Uncharacterized protein.	0.864
C3XZB6_BRAFL	C3Z445_BRAFL	C3XZB6	C3Z445	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.576
C3XZB6_BRAFL	C3ZHT4_BRAFL	C3XZB6	C3ZHT4	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.562
C3XZB6_BRAFL	C3ZPQ3_BRAFL	C3XZB6	C3ZPQ3	Uncharacterized protein.	Uncharacterized protein.	0.496
C3XZB6_BRAFL	C3ZQC3_BRAFL	C3XZB6	C3ZQC3	Uncharacterized protein.	Uncharacterized protein.	0.556
C3Y1X8_BRAFL	C3YBC4_BRAFL	C3Y1X8	C3YBC4	Uncharacterized protein.	Uncharacterized protein.	0.448
C3Y1X8_BRAFL	C3YBC6_BRAFL	C3Y1X8	C3YBC6	Uncharacterized protein.	Uncharacterized protein.	0.408
C3Y1X9_BRAFL	C3YBC4_BRAFL	C3Y1X9	C3YBC4	EB1 C-terminal domain-containing protein.	Uncharacterized protein.	0.448
C3Y1X9_BRAFL	C3YBC6_BRAFL	C3Y1X9	C3YBC6	EB1 C-terminal domain-containing protein.	Uncharacterized protein.	0.408
C3YB36_BRAFL	C3YQR6_BRAFL	C3YB36	C3YQR6	Uncharacterized protein.	Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity.	0.488
C3YB36_BRAFL	C3YXU7_BRAFL	C3YB36	C3YXU7	Uncharacterized protein.	Transgelin; Belongs to the calponin family.	0.487
C3YBC4_BRAFL	C3Y1X8_BRAFL	C3YBC4	C3Y1X8	Uncharacterized protein.	Uncharacterized protein.	0.448
C3YBC4_BRAFL	C3Y1X9_BRAFL	C3YBC4	C3Y1X9	Uncharacterized protein.	EB1 C-terminal domain-containing protein.	0.448
C3YBC6_BRAFL	C3Y1X8_BRAFL	C3YBC6	C3Y1X8	Uncharacterized protein.	Uncharacterized protein.	0.408
C3YBC6_BRAFL	C3Y1X9_BRAFL	C3YBC6	C3Y1X9	Uncharacterized protein.	EB1 C-terminal domain-containing protein.	0.408
C3YIE4_BRAFL	C3YJ05_BRAFL	C3YIE4	C3YJ05	Calponin-homology (CH) domain-containing protein.	Calponin-homology (CH) domain-containing protein.	0.400
C3YJ05_BRAFL	C3YIE4_BRAFL	C3YJ05	C3YIE4	Calponin-homology (CH) domain-containing protein.	Calponin-homology (CH) domain-containing protein.	0.400