(22 nodes) Histidine kinase/HSP90-like ATPase superfamily network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YSN2_BRAFL	HMG box domain-containing protein. (1034 aa)
	C3YSN0_BRAFL	HMG box domain-containing protein. (1072 aa)
	C3YBR8_BRAFL	HEPN domain-containing protein. (4521 aa)
	C3YB80_BRAFL	HEPN domain-containing protein. (4895 aa)
	C3Y458_BRAFL	DNA_mis_repair domain-containing protein. (717 aa)
	C3Y157_BRAFL	Uncharacterized protein. (738 aa)
	C3XX79_BRAFL	Uncharacterized protein. (660 aa)
	C3XVY7_BRAFL	CW-type domain-containing protein. (465 aa)
	C3XS32_BRAFL	HATPase_c domain-containing protein. (731 aa)
	C3XRA3_BRAFL	HATPase_c domain-containing protein. (725 aa)
	C3XR93_BRAFL	DNA_mis_repair domain-containing protein. (362 aa)
	C3ZS16_BRAFL	SMC hinge domain-containing protein. (1932 aa)
	C3ZQ95_BRAFL	HEPN domain-containing protein. (4368 aa)
	C3ZN29_BRAFL	CW-type domain-containing protein. (569 aa)
	C3ZHT9_BRAFL	Protein-serine/threonine kinase. (425 aa)
	C3ZGW2_BRAFL	Protein-serine/threonine kinase. (401 aa)
	C3Z8S6_BRAFL	Uncharacterized protein. (625 aa)
	C3Z7U0_BRAFL	DNA_mis_repair domain-containing protein. (429 aa)
	C3Z648_BRAFL	CW-type domain-containing protein. (769 aa)
	C3Z3Z3_BRAFL	Uncharacterized protein. (157 aa)
	C3Z272_BRAFL	Uncharacterized protein. (725 aa)
	C3YVP6_BRAFL	Uncharacterized protein. (4931 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XR93_BRAFL	C3Y458_BRAFL	C3XR93	C3Y458	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.997
C3XR93_BRAFL	C3YSN0_BRAFL	C3XR93	C3YSN0	DNA_mis_repair domain-containing protein.	HMG box domain-containing protein.	0.704
C3XR93_BRAFL	C3YSN2_BRAFL	C3XR93	C3YSN2	DNA_mis_repair domain-containing protein.	HMG box domain-containing protein.	0.707
C3XR93_BRAFL	C3Z7U0_BRAFL	C3XR93	C3Z7U0	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.726
C3XRA3_BRAFL	C3XS32_BRAFL	C3XRA3	C3XS32	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.900
C3XRA3_BRAFL	C3ZGW2_BRAFL	C3XRA3	C3ZGW2	HATPase_c domain-containing protein.	Protein-serine/threonine kinase.	0.435
C3XRA3_BRAFL	C3ZHT9_BRAFL	C3XRA3	C3ZHT9	HATPase_c domain-containing protein.	Protein-serine/threonine kinase.	0.442
C3XS32_BRAFL	C3XRA3_BRAFL	C3XS32	C3XRA3	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.900
C3XS32_BRAFL	C3ZGW2_BRAFL	C3XS32	C3ZGW2	HATPase_c domain-containing protein.	Protein-serine/threonine kinase.	0.435
C3XS32_BRAFL	C3ZHT9_BRAFL	C3XS32	C3ZHT9	HATPase_c domain-containing protein.	Protein-serine/threonine kinase.	0.442
C3XX79_BRAFL	C3ZGW2_BRAFL	C3XX79	C3ZGW2	Uncharacterized protein.	Protein-serine/threonine kinase.	0.435
C3XX79_BRAFL	C3ZHT9_BRAFL	C3XX79	C3ZHT9	Uncharacterized protein.	Protein-serine/threonine kinase.	0.438
C3Y458_BRAFL	C3XR93_BRAFL	C3Y458	C3XR93	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.997
C3Y458_BRAFL	C3YSN0_BRAFL	C3Y458	C3YSN0	DNA_mis_repair domain-containing protein.	HMG box domain-containing protein.	0.983
C3Y458_BRAFL	C3YSN2_BRAFL	C3Y458	C3YSN2	DNA_mis_repair domain-containing protein.	HMG box domain-containing protein.	0.983
C3Y458_BRAFL	C3Z7U0_BRAFL	C3Y458	C3Z7U0	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.994
C3YSN0_BRAFL	C3XR93_BRAFL	C3YSN0	C3XR93	HMG box domain-containing protein.	DNA_mis_repair domain-containing protein.	0.704
C3YSN0_BRAFL	C3Y458_BRAFL	C3YSN0	C3Y458	HMG box domain-containing protein.	DNA_mis_repair domain-containing protein.	0.983
C3YSN0_BRAFL	C3YSN2_BRAFL	C3YSN0	C3YSN2	HMG box domain-containing protein.	HMG box domain-containing protein.	0.543
C3YSN0_BRAFL	C3Z7U0_BRAFL	C3YSN0	C3Z7U0	HMG box domain-containing protein.	DNA_mis_repair domain-containing protein.	0.726