(7 nodes) Ras GTPase-activating protein network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZGU2_BRAFL	Uncharacterized protein. (865 aa)
	C3Z472_BRAFL	PH domain-containing protein. (232 aa)
	C3ZF12_BRAFL	Uncharacterized protein. (907 aa)
	C3ZV77_BRAFL	Ras-GAP domain-containing protein. (1311 aa)
	C3ZV81_BRAFL	CRAL-TRIO domain-containing protein. (1389 aa)
	C3Z471_BRAFL	Uncharacterized protein. (583 aa)
	C3Y2M9_BRAFL	Uncharacterized protein. (1333 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y2M9_BRAFL	C3Z471_BRAFL	C3Y2M9	C3Z471	Uncharacterized protein.	Uncharacterized protein.	0.600
C3Y2M9_BRAFL	C3Z472_BRAFL	C3Y2M9	C3Z472	Uncharacterized protein.	PH domain-containing protein.	0.418
C3Y2M9_BRAFL	C3ZF12_BRAFL	C3Y2M9	C3ZF12	Uncharacterized protein.	Uncharacterized protein.	0.672
C3Y2M9_BRAFL	C3ZGU2_BRAFL	C3Y2M9	C3ZGU2	Uncharacterized protein.	Uncharacterized protein.	0.757
C3Y2M9_BRAFL	C3ZV77_BRAFL	C3Y2M9	C3ZV77	Uncharacterized protein.	Ras-GAP domain-containing protein.	0.528
C3Y2M9_BRAFL	C3ZV81_BRAFL	C3Y2M9	C3ZV81	Uncharacterized protein.	CRAL-TRIO domain-containing protein.	0.528
C3Z471_BRAFL	C3Y2M9_BRAFL	C3Z471	C3Y2M9	Uncharacterized protein.	Uncharacterized protein.	0.600
C3Z471_BRAFL	C3Z472_BRAFL	C3Z471	C3Z472	Uncharacterized protein.	PH domain-containing protein.	0.936
C3Z471_BRAFL	C3ZF12_BRAFL	C3Z471	C3ZF12	Uncharacterized protein.	Uncharacterized protein.	0.402
C3Z471_BRAFL	C3ZGU2_BRAFL	C3Z471	C3ZGU2	Uncharacterized protein.	Uncharacterized protein.	0.585
C3Z471_BRAFL	C3ZV77_BRAFL	C3Z471	C3ZV77	Uncharacterized protein.	Ras-GAP domain-containing protein.	0.403
C3Z471_BRAFL	C3ZV81_BRAFL	C3Z471	C3ZV81	Uncharacterized protein.	CRAL-TRIO domain-containing protein.	0.403
C3Z472_BRAFL	C3Y2M9_BRAFL	C3Z472	C3Y2M9	PH domain-containing protein.	Uncharacterized protein.	0.418
C3Z472_BRAFL	C3Z471_BRAFL	C3Z472	C3Z471	PH domain-containing protein.	Uncharacterized protein.	0.936
C3Z472_BRAFL	C3ZGU2_BRAFL	C3Z472	C3ZGU2	PH domain-containing protein.	Uncharacterized protein.	0.418
C3ZF12_BRAFL	C3Y2M9_BRAFL	C3ZF12	C3Y2M9	Uncharacterized protein.	Uncharacterized protein.	0.672
C3ZF12_BRAFL	C3Z471_BRAFL	C3ZF12	C3Z471	Uncharacterized protein.	Uncharacterized protein.	0.402
C3ZF12_BRAFL	C3ZGU2_BRAFL	C3ZF12	C3ZGU2	Uncharacterized protein.	Uncharacterized protein.	0.771
C3ZF12_BRAFL	C3ZV77_BRAFL	C3ZF12	C3ZV77	Uncharacterized protein.	Ras-GAP domain-containing protein.	0.512
C3ZF12_BRAFL	C3ZV81_BRAFL	C3ZF12	C3ZV81	Uncharacterized protein.	CRAL-TRIO domain-containing protein.	0.512