42 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YIR8_BRAFL	Uncharacterized protein. (297 aa)
	C3ZQH3_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (285 aa)
	C3ZM48_BRAFL	Uncharacterized protein. (220 aa)
	C3ZLC6_BRAFL	Uncharacterized protein. (219 aa)
	C3ZLC5_BRAFL	Uncharacterized protein. (221 aa)
	C3Y0B2_BRAFL	Uncharacterized protein. (243 aa)
	C3Y0K8_BRAFL	Uncharacterized protein. (431 aa)
	C3Y1F6_BRAFL	Uncharacterized protein. (323 aa)
	C3Y8L6_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (275 aa)
	C3YE42_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (198 aa)
	C3YE53_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (197 aa)
	C3YE54_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (202 aa)
	C3YYA8_BRAFL	Uncharacterized protein. (245 aa)
	C3YXR5_BRAFL	GST N-terminal domain-containing protein. (239 aa)
	C3YTK0_BRAFL	Uncharacterized protein. (538 aa)
	C3YS09_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (554 aa)
	C3ZQI5_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (270 aa)
	C3YI21_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (220 aa)
	C3ZJH2_BRAFL	Uncharacterized protein. (269 aa)
	C3ZEM8_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (218 aa)
	C3XTI0_BRAFL	Uncharacterized protein. (264 aa)
	C3XTJ2_BRAFL	GST C-terminal domain-containing protein; Belongs to the GST superfamily. (336 aa)
	C3ZAV7_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (334 aa)
	C3Z5J2_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (212 aa)
	C3Z5F2_BRAFL	GST N-terminal domain-containing protein. (194 aa)
	C3Z149_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (234 aa)
	C3Z147_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (237 aa)
	C3Z132_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (242 aa)
	C3YYB5_BRAFL	Uncharacterized protein. (312 aa)
	C3YYB3_BRAFL	Uncharacterized protein. (243 aa)
	C3YYB2_BRAFL	Uncharacterized protein. (243 aa)
	C3XUE3_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (226 aa)
	C3XUE2_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (226 aa)
	C3XUE1_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (230 aa)
	C3XUE5_BRAFL	Uncharacterized protein. (218 aa)
	C3XYS8_BRAFL	GST N-terminal domain-containing protein. (383 aa)
	C3XZ19_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (200 aa)
	C3Y038_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (197 aa)
	C3ZZV5_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (203 aa)
	C3ZT22_BRAFL	Uncharacterized protein. (240 aa)
	C3ZRU5_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (214 aa)
	C3ZRU1_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (239 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XTJ2_BRAFL	C3Y0K8_BRAFL	C3XTJ2	C3Y0K8	GST C-terminal domain-containing protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.646
C3XUE1_BRAFL	C3XZ19_BRAFL	C3XUE1	C3XZ19	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.686
C3XUE1_BRAFL	C3Y038_BRAFL	C3XUE1	C3Y038	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.686
C3XUE1_BRAFL	C3Y0K8_BRAFL	C3XUE1	C3Y0K8	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.403
C3XUE1_BRAFL	C3Y8L6_BRAFL	C3XUE1	C3Y8L6	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.694
C3XUE1_BRAFL	C3YI21_BRAFL	C3XUE1	C3YI21	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.686
C3XUE1_BRAFL	C3Z147_BRAFL	C3XUE1	C3Z147	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.725
C3XUE1_BRAFL	C3Z5F2_BRAFL	C3XUE1	C3Z5F2	Uncharacterized protein; Belongs to the GST superfamily.	GST N-terminal domain-containing protein.	0.686
C3XUE1_BRAFL	C3Z5J2_BRAFL	C3XUE1	C3Z5J2	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.728
C3XUE1_BRAFL	C3ZEM8_BRAFL	C3XUE1	C3ZEM8	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.686
C3XUE1_BRAFL	C3ZM48_BRAFL	C3XUE1	C3ZM48	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.686
C3XUE1_BRAFL	C3ZRU1_BRAFL	C3XUE1	C3ZRU1	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.725
C3XUE1_BRAFL	C3ZRU5_BRAFL	C3XUE1	C3ZRU5	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.725
C3XUE2_BRAFL	C3Y0K8_BRAFL	C3XUE2	C3Y0K8	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.403
C3XUE3_BRAFL	C3Y0K8_BRAFL	C3XUE3	C3Y0K8	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.403
C3XUE5_BRAFL	C3Y0K8_BRAFL	C3XUE5	C3Y0K8	Uncharacterized protein.	Uncharacterized protein.	0.403
C3XZ19_BRAFL	C3XUE1_BRAFL	C3XZ19	C3XUE1	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.686
C3XZ19_BRAFL	C3Y038_BRAFL	C3XZ19	C3Y038	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.660
C3XZ19_BRAFL	C3Y8L6_BRAFL	C3XZ19	C3Y8L6	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.668
C3XZ19_BRAFL	C3YI21_BRAFL	C3XZ19	C3YI21	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.761