30 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YG98_BRAFL	Uncharacterized protein. (480 aa)
	C3YBZ7_BRAFL	Uncharacterized protein. (642 aa)
	C3YBI5_BRAFL	3-hydroxy-3-methylglutaryl coenzyme A reductase. (876 aa)
	C3Y397_BRAFL	Uncharacterized protein. (140 aa)
	C3Y377_BRAFL	acidPPc domain-containing protein. (192 aa)
	C3Y1G0_BRAFL	Uncharacterized protein. (201 aa)
	C3XXF7_BRAFL	BHLH domain-containing protein. (1047 aa)
	C3XWE8_BRAFL	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (387 aa)
	C3XW38_BRAFL	3Beta_HSD domain-containing protein. (200 aa)
	C3XV15_BRAFL	Uncharacterized protein. (232 aa)
	C4A0D8_BRAFL	EXPERA domain-containing protein. (228 aa)
	C4A078_BRAFL	Uncharacterized protein. (155 aa)
	C4A044_BRAFL	Uncharacterized protein. (170 aa)
	C4A042_BRAFL	Uncharacterized protein. (450 aa)
	C3ZUG5_BRAFL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (309 aa)
	C3ZSQ5_BRAFL	Uncharacterized protein. (167 aa)
	C3ZSQ2_BRAFL	Uncharacterized protein. (246 aa)
	C3ZMH0_BRAFL	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (279 aa)
	C3ZHW4_BRAFL	Uncharacterized protein. (205 aa)
	C3ZGP5_BRAFL	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (409 aa)
	C3ZEE5_BRAFL	EXPERA domain-containing protein. (205 aa)
	C3ZA79_BRAFL	SE domain-containing protein. (530 aa)
	C3Z3Y3_BRAFL	Mevalonate kinase. (384 aa)
	C3Z399_BRAFL	Nudix hydrolase domain-containing protein. (228 aa)
	C3YTI2_BRAFL	FAD-binding PCMH-type domain-containing protein. (517 aa)
	C3YSZ9_BRAFL	FAD-binding PCMH-type domain-containing protein. (517 aa)
	C3YNT0_BRAFL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (357 aa)
	C3YHY5_BRAFL	FAD-binding PCMH-type domain-containing protein. (379 aa)
	C3YHW8_BRAFL	FAD-binding PCMH-type domain-containing protein. (419 aa)
	C3YBZ8_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (493 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XV15_BRAFL	C3XW38_BRAFL	C3XV15	C3XW38	Uncharacterized protein.	3Beta_HSD domain-containing protein.	0.831
C3XV15_BRAFL	C3XWE8_BRAFL	C3XV15	C3XWE8	Uncharacterized protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.961
C3XV15_BRAFL	C3YBI5_BRAFL	C3XV15	C3YBI5	Uncharacterized protein.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.585
C3XV15_BRAFL	C3YBZ7_BRAFL	C3XV15	C3YBZ7	Uncharacterized protein.	Uncharacterized protein.	0.989
C3XV15_BRAFL	C3YBZ8_BRAFL	C3XV15	C3YBZ8	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.988
C3XV15_BRAFL	C3YG98_BRAFL	C3XV15	C3YG98	Uncharacterized protein.	Uncharacterized protein.	0.915
C3XV15_BRAFL	C3YNT0_BRAFL	C3XV15	C3YNT0	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.612
C3XV15_BRAFL	C3YSZ9_BRAFL	C3XV15	C3YSZ9	Uncharacterized protein.	FAD-binding PCMH-type domain-containing protein.	0.411
C3XV15_BRAFL	C3YTI2_BRAFL	C3XV15	C3YTI2	Uncharacterized protein.	FAD-binding PCMH-type domain-containing protein.	0.411
C3XV15_BRAFL	C3Z399_BRAFL	C3XV15	C3Z399	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.736
C3XV15_BRAFL	C3Z3Y3_BRAFL	C3XV15	C3Z3Y3	Uncharacterized protein.	Mevalonate kinase.	0.700
C3XV15_BRAFL	C3ZA79_BRAFL	C3XV15	C3ZA79	Uncharacterized protein.	SE domain-containing protein.	0.815
C3XV15_BRAFL	C3ZGP5_BRAFL	C3XV15	C3ZGP5	Uncharacterized protein.	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.	0.594
C3XV15_BRAFL	C3ZMH0_BRAFL	C3XV15	C3ZMH0	Uncharacterized protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.961
C3XV15_BRAFL	C3ZSQ2_BRAFL	C3XV15	C3ZSQ2	Uncharacterized protein.	Uncharacterized protein.	0.933
C3XV15_BRAFL	C3ZSQ5_BRAFL	C3XV15	C3ZSQ5	Uncharacterized protein.	Uncharacterized protein.	0.933
C3XV15_BRAFL	C4A042_BRAFL	C3XV15	C4A042	Uncharacterized protein.	Uncharacterized protein.	0.915
C3XV15_BRAFL	C4A044_BRAFL	C3XV15	C4A044	Uncharacterized protein.	Uncharacterized protein.	0.915
C3XV15_BRAFL	C4A0D8_BRAFL	C3XV15	C4A0D8	Uncharacterized protein.	EXPERA domain-containing protein.	0.519
C3XW38_BRAFL	C3XV15_BRAFL	C3XW38	C3XV15	3Beta_HSD domain-containing protein.	Uncharacterized protein.	0.831