(34 nodes) Synthesis of bile acids and bile salts network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Z6H2_BRAFL	NR LBD domain-containing protein. (121 aa)
	C3XRW2_BRAFL	Uncharacterized protein. (630 aa)
	C3YE84_BRAFL	Oxysterol-binding protein; Belongs to the OSBP family. (1305 aa)
	C3YGH0_BRAFL	Uncharacterized protein. (256 aa)
	C3YIU7_BRAFL	Uncharacterized protein. (1125 aa)
	C3YPS7_BRAFL	Uncharacterized protein. (480 aa)
	C3YQL7_BRAFL	SCP2 domain-containing protein. (128 aa)
	C3YT22_BRAFL	Uncharacterized protein. (263 aa)
	C3YT24_BRAFL	SCP2 domain-containing protein. (412 aa)
	C3YTE1_BRAFL	Uncharacterized protein. (465 aa)
	C3YVZ6_BRAFL	PH domain-containing protein. (314 aa)
	C3YVZ7_BRAFL	PH domain-containing protein. (526 aa)
	C3YW21_BRAFL	Uncharacterized protein. (74 aa)
	C3YW22_BRAFL	Uncharacterized protein. (93 aa)
	C3YW23_BRAFL	Uncharacterized protein. (214 aa)
	C3Z2D4_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (1154 aa)
	C3Z332_BRAFL	Uncharacterized protein. (829 aa)
	C3Z661_BRAFL	Uncharacterized protein. (380 aa)
	C3Z6H1_BRAFL	Uncharacterized protein. (491 aa)
	C3Z6H4_BRAFL	Uncharacterized protein. (320 aa)
	C3ZBK3_BRAFL	Uncharacterized protein. (105 aa)
	C3ZHW2_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (447 aa)
	C3ZKR6_BRAFL	Uncharacterized protein. (648 aa)
	C3ZKR7_BRAFL	Uncharacterized protein. (270 aa)
	C3ZLJ3_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (457 aa)
	C3ZPI0_BRAFL	SCP2 domain-containing protein. (112 aa)
	C3ZPI1_BRAFL	MaoC-like domain-containing protein. (209 aa)
	C3ZTV1_BRAFL	Oxysterol-binding protein; Belongs to the OSBP family. (806 aa)
	C3ZUF9_BRAFL	PH domain-containing protein. (312 aa)
	C3ZVX5_BRAFL	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (540 aa)
	C3ZXV0_BRAFL	LRRNT domain-containing protein. (531 aa)
	C3ZZI9_BRAFL	Uncharacterized protein. (335 aa)
	C3ZZJ3_BRAFL	Uncharacterized protein. (314 aa)
	C3ZZZ0_BRAFL	Uncharacterized protein. (525 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3YGH0_BRAFL	C3YQL7_BRAFL	C3YGH0	C3YQL7	Uncharacterized protein.	SCP2 domain-containing protein.	0.608
C3YGH0_BRAFL	C3YT22_BRAFL	C3YGH0	C3YT22	Uncharacterized protein.	Uncharacterized protein.	0.479
C3YGH0_BRAFL	C3YT24_BRAFL	C3YGH0	C3YT24	Uncharacterized protein.	SCP2 domain-containing protein.	0.481
C3YGH0_BRAFL	C3YW21_BRAFL	C3YGH0	C3YW21	Uncharacterized protein.	Uncharacterized protein.	0.874
C3YGH0_BRAFL	C3YW22_BRAFL	C3YGH0	C3YW22	Uncharacterized protein.	Uncharacterized protein.	0.874
C3YGH0_BRAFL	C3YW23_BRAFL	C3YGH0	C3YW23	Uncharacterized protein.	Uncharacterized protein.	0.874
C3YGH0_BRAFL	C3Z661_BRAFL	C3YGH0	C3Z661	Uncharacterized protein.	Uncharacterized protein.	0.874
C3YGH0_BRAFL	C3ZPI1_BRAFL	C3YGH0	C3ZPI1	Uncharacterized protein.	MaoC-like domain-containing protein.	0.650
C3YGH0_BRAFL	C3ZVX5_BRAFL	C3YGH0	C3ZVX5	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.608
C3YQL7_BRAFL	C3YGH0_BRAFL	C3YQL7	C3YGH0	SCP2 domain-containing protein.	Uncharacterized protein.	0.608
C3YQL7_BRAFL	C3YT22_BRAFL	C3YQL7	C3YT22	SCP2 domain-containing protein.	Uncharacterized protein.	0.608
C3YQL7_BRAFL	C3YT24_BRAFL	C3YQL7	C3YT24	SCP2 domain-containing protein.	SCP2 domain-containing protein.	0.608
C3YQL7_BRAFL	C3YW21_BRAFL	C3YQL7	C3YW21	SCP2 domain-containing protein.	Uncharacterized protein.	0.596
C3YQL7_BRAFL	C3YW22_BRAFL	C3YQL7	C3YW22	SCP2 domain-containing protein.	Uncharacterized protein.	0.596
C3YQL7_BRAFL	C3YW23_BRAFL	C3YQL7	C3YW23	SCP2 domain-containing protein.	Uncharacterized protein.	0.596
C3YQL7_BRAFL	C3Z661_BRAFL	C3YQL7	C3Z661	SCP2 domain-containing protein.	Uncharacterized protein.	0.596
C3YQL7_BRAFL	C3ZPI1_BRAFL	C3YQL7	C3ZPI1	SCP2 domain-containing protein.	MaoC-like domain-containing protein.	0.923
C3YQL7_BRAFL	C3ZVX5_BRAFL	C3YQL7	C3ZVX5	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.770
C3YT22_BRAFL	C3YGH0_BRAFL	C3YT22	C3YGH0	Uncharacterized protein.	Uncharacterized protein.	0.479
C3YT22_BRAFL	C3YQL7_BRAFL	C3YT22	C3YQL7	Uncharacterized protein.	SCP2 domain-containing protein.	0.608