(22 nodes) Carnitine metabolism network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZQ85_BRAFL	Uncharacterized protein. (463 aa)
	C3YLM0_BRAFL	Mab-21 domain-containing protein. (326 aa)
	C3YLM1_BRAFL	Mab-21 domain-containing protein. (457 aa)
	C3YLM2_BRAFL	Mab-21 domain-containing protein. (301 aa)
	C3YU69_BRAFL	Mab-21 domain-containing protein. (496 aa)
	C3Z051_BRAFL	Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family. (776 aa)
	C3Z4D7_BRAFL	Mab-21 domain-containing protein. (627 aa)
	C3ZKJ6_BRAFL	Mab-21 domain-containing protein. (417 aa)
	C3ZPP4_BRAFL	Uncharacterized protein. (763 aa)
	C3ZQ79_BRAFL	Uncharacterized protein. (924 aa)
	C3ZQ80_BRAFL	ACC_central domain-containing protein. (166 aa)
	C3ZW15_BRAFL	Uncharacterized protein. (246 aa)
	C3ZW16_BRAFL	Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family. (551 aa)
	C3YLL9_BRAFL	Mab-21 domain-containing protein. (275 aa)
	C3YLL7_BRAFL	Mab-21 domain-containing protein. (414 aa)
	C3YJ90_BRAFL	Mab-21 domain-containing protein. (475 aa)
	C3YF93_BRAFL	Mab-21 domain-containing protein. (558 aa)
	C3YAY8_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (297 aa)
	C3Y3A2_BRAFL	Mab-21 domain-containing protein. (614 aa)
	C3Y390_BRAFL	Mab-21 domain-containing protein. (359 aa)
	C3XZ23_BRAFL	Uncharacterized protein. (600 aa)
	C3XRB3_BRAFL	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (351 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3YAY8_BRAFL	C3Z051_BRAFL	C3YAY8	C3Z051	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.	0.824
C3YAY8_BRAFL	C3ZW16_BRAFL	C3YAY8	C3ZW16	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.	0.454
C3Z051_BRAFL	C3YAY8_BRAFL	C3Z051	C3YAY8	Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.824
C3ZPP4_BRAFL	C3ZQ79_BRAFL	C3ZPP4	C3ZQ79	Uncharacterized protein.	Uncharacterized protein.	0.929
C3ZPP4_BRAFL	C3ZQ80_BRAFL	C3ZPP4	C3ZQ80	Uncharacterized protein.	ACC_central domain-containing protein.	0.993
C3ZPP4_BRAFL	C3ZQ85_BRAFL	C3ZPP4	C3ZQ85	Uncharacterized protein.	Uncharacterized protein.	0.942
C3ZQ79_BRAFL	C3ZPP4_BRAFL	C3ZQ79	C3ZPP4	Uncharacterized protein.	Uncharacterized protein.	0.929
C3ZQ79_BRAFL	C3ZQ80_BRAFL	C3ZQ79	C3ZQ80	Uncharacterized protein.	ACC_central domain-containing protein.	0.928
C3ZQ79_BRAFL	C3ZQ85_BRAFL	C3ZQ79	C3ZQ85	Uncharacterized protein.	Uncharacterized protein.	0.923
C3ZQ80_BRAFL	C3ZPP4_BRAFL	C3ZQ80	C3ZPP4	ACC_central domain-containing protein.	Uncharacterized protein.	0.993
C3ZQ80_BRAFL	C3ZQ79_BRAFL	C3ZQ80	C3ZQ79	ACC_central domain-containing protein.	Uncharacterized protein.	0.928
C3ZQ80_BRAFL	C3ZQ85_BRAFL	C3ZQ80	C3ZQ85	ACC_central domain-containing protein.	Uncharacterized protein.	0.948
C3ZQ85_BRAFL	C3ZPP4_BRAFL	C3ZQ85	C3ZPP4	Uncharacterized protein.	Uncharacterized protein.	0.942
C3ZQ85_BRAFL	C3ZQ79_BRAFL	C3ZQ85	C3ZQ79	Uncharacterized protein.	Uncharacterized protein.	0.923
C3ZQ85_BRAFL	C3ZQ80_BRAFL	C3ZQ85	C3ZQ80	Uncharacterized protein.	ACC_central domain-containing protein.	0.948
C3ZW15_BRAFL	C3ZW16_BRAFL	C3ZW15	C3ZW16	Uncharacterized protein.	Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.	0.946
C3ZW16_BRAFL	C3YAY8_BRAFL	C3ZW16	C3YAY8	Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.454
C3ZW16_BRAFL	C3ZW15_BRAFL	C3ZW16	C3ZW15	Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.	Uncharacterized protein.	0.946