(18 nodes) Keratan sulfate biosynthesis network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C4A018_BRAFL	Uncharacterized protein. (254 aa)
	C3XRR2_BRAFL	Uncharacterized protein. (186 aa)
	C3XUZ4_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (330 aa)
	C3XVV1_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (478 aa)
	C3YA65_BRAFL	Uncharacterized protein. (381 aa)
	C3YBZ3_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (371 aa)
	C3YGC2_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (301 aa)
	C3YGC3_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (355 aa)
	C3YLU7_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (403 aa)
	C3YQJ1_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (480 aa)
	C3YRG2_BRAFL	Uncharacterized protein. (477 aa)
	C3Z7H9_BRAFL	Uncharacterized protein. (554 aa)
	C3Z7U1_BRAFL	Importin N-terminal domain-containing protein. (1103 aa)
	C3Z7X8_BRAFL	Uncharacterized protein. (283 aa)
	C3Z7X9_BRAFL	Uncharacterized protein. (248 aa)
	C3Z7Y0_BRAFL	Uncharacterized protein. (215 aa)
	C3ZBD5_BRAFL	Uncharacterized protein. (397 aa)
	C3ZTD7_BRAFL	Uncharacterized protein. (352 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRR2_BRAFL	C3YBZ3_BRAFL	C3XRR2	C3YBZ3	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.911
C3XRR2_BRAFL	C3YQJ1_BRAFL	C3XRR2	C3YQJ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.911
C3YA65_BRAFL	C3Z7H9_BRAFL	C3YA65	C3Z7H9	Uncharacterized protein.	Uncharacterized protein.	0.912
C3YBZ3_BRAFL	C3XRR2_BRAFL	C3YBZ3	C3XRR2	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YBZ3_BRAFL	C3YQJ1_BRAFL	C3YBZ3	C3YQJ1	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.910
C3YBZ3_BRAFL	C3Z7X8_BRAFL	C3YBZ3	C3Z7X8	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YBZ3_BRAFL	C3Z7X9_BRAFL	C3YBZ3	C3Z7X9	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YBZ3_BRAFL	C3Z7Y0_BRAFL	C3YBZ3	C3Z7Y0	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YBZ3_BRAFL	C3ZTD7_BRAFL	C3YBZ3	C3ZTD7	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.900
C3YBZ3_BRAFL	C4A018_BRAFL	C3YBZ3	C4A018	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YQJ1_BRAFL	C3XRR2_BRAFL	C3YQJ1	C3XRR2	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YQJ1_BRAFL	C3YBZ3_BRAFL	C3YQJ1	C3YBZ3	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.910
C3YQJ1_BRAFL	C3Z7X8_BRAFL	C3YQJ1	C3Z7X8	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YQJ1_BRAFL	C3Z7X9_BRAFL	C3YQJ1	C3Z7X9	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YQJ1_BRAFL	C3Z7Y0_BRAFL	C3YQJ1	C3Z7Y0	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YQJ1_BRAFL	C3ZTD7_BRAFL	C3YQJ1	C3ZTD7	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.900
C3YQJ1_BRAFL	C4A018_BRAFL	C3YQJ1	C4A018	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3Z7H9_BRAFL	C3YA65_BRAFL	C3Z7H9	C3YA65	Uncharacterized protein.	Uncharacterized protein.	0.912
C3Z7X8_BRAFL	C3YBZ3_BRAFL	C3Z7X8	C3YBZ3	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.911
C3Z7X8_BRAFL	C3YQJ1_BRAFL	C3Z7X8	C3YQJ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.911