(27 nodes) Chondroitin sulfate biosynthesis network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YXK7_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (436 aa)
	C3Z2Z0_BRAFL	Carbohydrate sulfotransferase. (376 aa)
	C3Z3I4_BRAFL	Uncharacterized protein. (57 aa)
	C3Z422_BRAFL	Hexosyltransferase. (704 aa)
	C3Z424_BRAFL	Uncharacterized protein. (175 aa)
	C3Z425_BRAFL	Hexosyltransferase. (1149 aa)
	C3ZE88_BRAFL	Uncharacterized protein. (56 aa)
	C3ZES5_BRAFL	Uncharacterized protein. (405 aa)
	C3ZLC3_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (456 aa)
	C3ZR56_BRAFL	Hexosyltransferase. (547 aa)
	C3ZR58_BRAFL	Hexosyltransferase. (768 aa)
	C3ZRP6_BRAFL	Hexosyltransferase. (187 aa)
	C3ZUV1_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (458 aa)
	C3ZUV2_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (325 aa)
	C3ZWV5_BRAFL	Uncharacterized protein. (57 aa)
	C3ZXI1_BRAFL	Hexosyltransferase. (732 aa)
	C3ZYC0_BRAFL	Uncharacterized protein. (84 aa)
	C3ZYQ3_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (335 aa)
	C3ZYQ2_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (403 aa)
	C3XQE4_BRAFL	Hexosyltransferase. (473 aa)
	C3XST6_BRAFL	Uncharacterized protein. (189 aa)
	C3Y3P1_BRAFL	Uncharacterized protein. (1980 aa)
	C3Y9N4_BRAFL	WSC domain-containing protein. (918 aa)
	C3YCQ7_BRAFL	Uncharacterized protein. (310 aa)
	C3YQ05_BRAFL	Hexosyltransferase. (892 aa)
	C3YUK6_BRAFL	Uncharacterized protein. (381 aa)
	C3YV46_BRAFL	Uncharacterized protein. (78 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQE4_BRAFL	C3XST6_BRAFL	C3XQE4	C3XST6	Hexosyltransferase.	Uncharacterized protein.	0.434
C3XQE4_BRAFL	C3YQ05_BRAFL	C3XQE4	C3YQ05	Hexosyltransferase.	Hexosyltransferase.	0.908
C3XQE4_BRAFL	C3Z424_BRAFL	C3XQE4	C3Z424	Hexosyltransferase.	Uncharacterized protein.	0.933
C3XQE4_BRAFL	C3ZR58_BRAFL	C3XQE4	C3ZR58	Hexosyltransferase.	Hexosyltransferase.	0.916
C3XQE4_BRAFL	C3ZRP6_BRAFL	C3XQE4	C3ZRP6	Hexosyltransferase.	Hexosyltransferase.	0.924
C3XST6_BRAFL	C3XQE4_BRAFL	C3XST6	C3XQE4	Uncharacterized protein.	Hexosyltransferase.	0.434
C3XST6_BRAFL	C3Z2Z0_BRAFL	C3XST6	C3Z2Z0	Uncharacterized protein.	Carbohydrate sulfotransferase.	0.493
C3XST6_BRAFL	C3ZES5_BRAFL	C3XST6	C3ZES5	Uncharacterized protein.	Uncharacterized protein.	0.509
C3XST6_BRAFL	C3ZR58_BRAFL	C3XST6	C3ZR58	Uncharacterized protein.	Hexosyltransferase.	0.467
C3XST6_BRAFL	C3ZWV5_BRAFL	C3XST6	C3ZWV5	Uncharacterized protein.	Uncharacterized protein.	0.509
C3XST6_BRAFL	C3ZYC0_BRAFL	C3XST6	C3ZYC0	Uncharacterized protein.	Uncharacterized protein.	0.509
C3Y9N4_BRAFL	C3YCQ7_BRAFL	C3Y9N4	C3YCQ7	WSC domain-containing protein.	Uncharacterized protein.	0.902
C3YCQ7_BRAFL	C3Y9N4_BRAFL	C3YCQ7	C3Y9N4	Uncharacterized protein.	WSC domain-containing protein.	0.902
C3YQ05_BRAFL	C3XQE4_BRAFL	C3YQ05	C3XQE4	Hexosyltransferase.	Hexosyltransferase.	0.908
C3YQ05_BRAFL	C3Z424_BRAFL	C3YQ05	C3Z424	Hexosyltransferase.	Uncharacterized protein.	0.902
C3YQ05_BRAFL	C3ZR58_BRAFL	C3YQ05	C3ZR58	Hexosyltransferase.	Hexosyltransferase.	0.918
C3YQ05_BRAFL	C3ZRP6_BRAFL	C3YQ05	C3ZRP6	Hexosyltransferase.	Hexosyltransferase.	0.902
C3YV46_BRAFL	C3Z3I4_BRAFL	C3YV46	C3Z3I4	Uncharacterized protein.	Uncharacterized protein.	0.534
C3YV46_BRAFL	C3ZE88_BRAFL	C3YV46	C3ZE88	Uncharacterized protein.	Uncharacterized protein.	0.512
C3YV46_BRAFL	C3ZES5_BRAFL	C3YV46	C3ZES5	Uncharacterized protein.	Uncharacterized protein.	0.612