(34 nodes) HS-GAG biosynthesis network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQ32_BRAFL	Uncharacterized protein. (1813 aa)
	C3XQ33_BRAFL	NtA domain-containing protein. (197 aa)
	C3XTN6_BRAFL	C5-epim_C domain-containing protein. (523 aa)
	C3XV06_BRAFL	Uncharacterized protein. (1546 aa)
	C3XV88_BRAFL	Uncharacterized protein. (1277 aa)
	C3XZ59_BRAFL	Uncharacterized protein. (3145 aa)
	C3Y744_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (595 aa)
	Slc6a15	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (733 aa)
	C3YB47_BRAFL	Uncharacterized protein. (1291 aa)
	C3YBS2_BRAFL	Uncharacterized protein. (892 aa)
	C3YF97_BRAFL	Uncharacterized protein. (543 aa)
	C3YF99_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (202 aa)
	C3YFU1_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (510 aa)
	C3YN13_BRAFL	Uncharacterized protein. (655 aa)
	C3YN16_BRAFL	Ig-like domain-containing protein. (85 aa)
	C3YPA1_BRAFL	SOCS box domain-containing protein; Belongs to the glycosyltransferase 47 family. (786 aa)
	C3YQW6_BRAFL	Uncharacterized protein. (564 aa)
	C3YSN4_BRAFL	Uncharacterized protein. (190 aa)
	C3ZE82_BRAFL	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (297 aa)
	C3ZE83_BRAFL	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (196 aa)
	C3ZEX6_BRAFL	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (361 aa)
	C3ZEX7_BRAFL	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (208 aa)
	C3ZEX9_BRAFL	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (480 aa)
	C3ZFC9_BRAFL	Laminin EGF-like domain-containing protein. (183 aa)
	C3ZFD0_BRAFL	Laminin EGF-like domain-containing protein. (394 aa)
	C3ZFD1_BRAFL	Laminin EGF-like domain-containing protein. (178 aa)
	C3ZFD2_BRAFL	Laminin EGF-like domain-containing protein. (185 aa)
	C3ZFK2_BRAFL	Uncharacterized protein. (1607 aa)
	C3ZPF5_BRAFL	Uncharacterized protein. (304 aa)
	C3ZSN3_BRAFL	Glyco_transf_64 domain-containing protein. (271 aa)
	C3ZSN4_BRAFL	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (107 aa)
	C3ZSN5_BRAFL	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (252 aa)
	C3ZSN8_BRAFL	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (1558 aa)
	C3ZZ74_BRAFL	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (551 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XTN6_BRAFL	C3YF97_BRAFL	C3XTN6	C3YF97	C5-epim_C domain-containing protein.	Uncharacterized protein.	0.432
C3XTN6_BRAFL	C3YF99_BRAFL	C3XTN6	C3YF99	C5-epim_C domain-containing protein.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.432
C3XTN6_BRAFL	C3YFU1_BRAFL	C3XTN6	C3YFU1	C5-epim_C domain-containing protein.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.585
C3XTN6_BRAFL	C3ZE82_BRAFL	C3XTN6	C3ZE82	C5-epim_C domain-containing protein.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.516
C3XTN6_BRAFL	C3ZE83_BRAFL	C3XTN6	C3ZE83	C5-epim_C domain-containing protein.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.516
C3XTN6_BRAFL	C3ZEX9_BRAFL	C3XTN6	C3ZEX9	C5-epim_C domain-containing protein.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.560
C3XTN6_BRAFL	C3ZPF5_BRAFL	C3XTN6	C3ZPF5	C5-epim_C domain-containing protein.	Uncharacterized protein.	0.712
C3XTN6_BRAFL	C3ZSN3_BRAFL	C3XTN6	C3ZSN3	C5-epim_C domain-containing protein.	Glyco_transf_64 domain-containing protein.	0.507
C3XTN6_BRAFL	C3ZSN4_BRAFL	C3XTN6	C3ZSN4	C5-epim_C domain-containing protein.	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.422
C3XTN6_BRAFL	C3ZSN8_BRAFL	C3XTN6	C3ZSN8	C5-epim_C domain-containing protein.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.564
C3Y744_BRAFL	C3YFU1_BRAFL	C3Y744	C3YFU1	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.408
C3Y744_BRAFL	C3YPA1_BRAFL	C3Y744	C3YPA1	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	SOCS box domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.651
C3Y744_BRAFL	C3ZEX6_BRAFL	C3Y744	C3ZEX6	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.427
C3Y744_BRAFL	C3ZEX7_BRAFL	C3Y744	C3ZEX7	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.427
C3Y744_BRAFL	C3ZEX9_BRAFL	C3Y744	C3ZEX9	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.571
C3Y744_BRAFL	C3ZSN3_BRAFL	C3Y744	C3ZSN3	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Glyco_transf_64 domain-containing protein.	0.896
C3Y744_BRAFL	C3ZSN4_BRAFL	C3Y744	C3ZSN4	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.800
C3Y744_BRAFL	C3ZSN5_BRAFL	C3Y744	C3ZSN5	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.651
C3Y744_BRAFL	C3ZSN8_BRAFL	C3Y744	C3ZSN8	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.494
C3Y744_BRAFL	C3ZZ74_BRAFL	C3Y744	C3ZZ74	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.651