(13 nodes) Molecules associated with elastic fibres network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZZF3_BRAFL	TGF_BETA_2 domain-containing protein. (109 aa)
	C3ZTY2_BRAFL	TGF_BETA_2 domain-containing protein. (273 aa)
	C3ZQI8_BRAFL	TGF_BETA_2 domain-containing protein. (126 aa)
	C3Z8C6_BRAFL	Uncharacterized protein. (166 aa)
	C3Z3V7_BRAFL	TGF_BETA_2 domain-containing protein. (115 aa)
	C3Z3V6_BRAFL	TGF_BETA_2 domain-containing protein. (411 aa)
	C3Z2Q5_BRAFL	Uncharacterized protein. (499 aa)
	C3Z1H2_BRAFL	Uncharacterized protein. (353 aa)
	C3YSY6_BRAFL	Uncharacterized protein. (132 aa)
	C3YMI8_BRAFL	TGF_BETA_2 domain-containing protein. (620 aa)
	C3YMD5_BRAFL	TGF_BETA_2 domain-containing protein. (114 aa)
	C3YLE2_BRAFL	TGF_BETA_2 domain-containing protein. (102 aa)
	C3XU87_BRAFL	Uncharacterized protein. (204 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3YLE2_BRAFL	C3YMD5_BRAFL	C3YLE2	C3YMD5	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.406
C3YLE2_BRAFL	C3Z3V6_BRAFL	C3YLE2	C3Z3V6	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.537
C3YLE2_BRAFL	C3ZTY2_BRAFL	C3YLE2	C3ZTY2	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.512
C3YLE2_BRAFL	C3ZZF3_BRAFL	C3YLE2	C3ZZF3	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.401
C3YMD5_BRAFL	C3YLE2_BRAFL	C3YMD5	C3YLE2	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.406
C3YMD5_BRAFL	C3Z3V7_BRAFL	C3YMD5	C3Z3V7	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.515
C3YMD5_BRAFL	C3ZQI8_BRAFL	C3YMD5	C3ZQI8	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.513
C3YMD5_BRAFL	C3ZTY2_BRAFL	C3YMD5	C3ZTY2	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.495
C3YMI8_BRAFL	C3Z3V7_BRAFL	C3YMI8	C3Z3V7	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.479
C3YMI8_BRAFL	C3ZQI8_BRAFL	C3YMI8	C3ZQI8	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.479
C3YMI8_BRAFL	C3ZTY2_BRAFL	C3YMI8	C3ZTY2	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.479
C3Z3V6_BRAFL	C3YLE2_BRAFL	C3Z3V6	C3YLE2	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.537
C3Z3V6_BRAFL	C3Z3V7_BRAFL	C3Z3V6	C3Z3V7	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.485
C3Z3V6_BRAFL	C3ZQI8_BRAFL	C3Z3V6	C3ZQI8	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.484
C3Z3V6_BRAFL	C3ZTY2_BRAFL	C3Z3V6	C3ZTY2	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.717
C3Z3V7_BRAFL	C3YMD5_BRAFL	C3Z3V7	C3YMD5	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.515
C3Z3V7_BRAFL	C3YMI8_BRAFL	C3Z3V7	C3YMI8	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.479
C3Z3V7_BRAFL	C3Z3V6_BRAFL	C3Z3V7	C3Z3V6	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.485
C3Z3V7_BRAFL	C3ZZF3_BRAFL	C3Z3V7	C3ZZF3	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.508
C3ZQI8_BRAFL	C3YMD5_BRAFL	C3ZQI8	C3YMD5	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.513