(36 nodes) Nuclear Pore Complex (NPC) Disassembly network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y917_BRAFL	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (750 aa)
	Q8T755_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (299 aa)
	C4A119_BRAFL	Uncharacterized protein. (414 aa)
	C3ZZL1_BRAFL	Uncharacterized protein. (489 aa)
	C3ZWP7_BRAFL	Uncharacterized protein. (489 aa)
	C3ZQV8_BRAFL	RanBD1 domain-containing protein. (130 aa)
	C3ZP64_BRAFL	Uncharacterized protein. (1316 aa)
	C3ZP63_BRAFL	Uncharacterized protein. (824 aa)
	C3ZK41_BRAFL	RanBD1 domain-containing protein. (358 aa)
	C3ZHQ1_BRAFL	Uncharacterized protein. (203 aa)
	C3ZGS7_BRAFL	C3H1-type domain-containing protein. (466 aa)
	C3ZGN0_BRAFL	WD_REPEATS_REGION domain-containing protein. (266 aa)
	C3ZEZ4_BRAFL	Uncharacterized protein. (3724 aa)
	C3ZEZ0_BRAFL	RanBD1 domain-containing protein. (490 aa)
	C3ZE12_BRAFL	Cyclin N-terminal domain-containing protein. (242 aa)
	C3ZDE1_BRAFL	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (323 aa)
	C3ZBF7_BRAFL	Nuclear pore protein. (815 aa)
	C3ZBB9_BRAFL	Uncharacterized protein. (340 aa)
	C3Z810_BRAFL	Uncharacterized protein. (1766 aa)
	C3Z4B2_BRAFL	Uncharacterized protein. (733 aa)
	C3Z3J7_BRAFL	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (316 aa)
	C3Z1R7_BRAFL	Uncharacterized protein. (1406 aa)
	C3YXC1_BRAFL	WD_REPEATS_REGION domain-containing protein. (383 aa)
	C3YVL3_BRAFL	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (318 aa)
	C3YM21_BRAFL	Uncharacterized protein. (1384 aa)
	C3YJ30_BRAFL	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (758 aa)
	C3YJ29_BRAFL	Uncharacterized protein. (131 aa)
	C3Y7F0_BRAFL	Uncharacterized protein. (1053 aa)
	C3Y7E9_BRAFL	Uncharacterized protein. (716 aa)
	C3Y7A7_BRAFL	WD_REPEATS_REGION domain-containing protein. (320 aa)
	C3Y3D6_BRAFL	Nsp1_C domain-containing protein. (421 aa)
	C3Y1B7_BRAFL	Uncharacterized protein. (1507 aa)
	C3XWM0_BRAFL	Uncharacterized protein. (314 aa)
	C3XWA2_BRAFL	Peptidase S59 domain-containing protein. (1834 aa)
	C3XV32_BRAFL	Uncharacterized protein. (457 aa)
	C3XRH9_BRAFL	Nucleoporin_C domain-containing protein. (822 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRH9_BRAFL	C3XV32_BRAFL	C3XRH9	C3XV32	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.864
C3XRH9_BRAFL	C3XWA2_BRAFL	C3XRH9	C3XWA2	Nucleoporin_C domain-containing protein.	Peptidase S59 domain-containing protein.	0.998
C3XRH9_BRAFL	C3XWM0_BRAFL	C3XRH9	C3XWM0	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.970
C3XRH9_BRAFL	C3Y1B7_BRAFL	C3XRH9	C3Y1B7	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.987
C3XRH9_BRAFL	C3Y3D6_BRAFL	C3XRH9	C3Y3D6	Nucleoporin_C domain-containing protein.	Nsp1_C domain-containing protein.	0.976
C3XRH9_BRAFL	C3Y7A7_BRAFL	C3XRH9	C3Y7A7	Nucleoporin_C domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
C3XRH9_BRAFL	C3Y7E9_BRAFL	C3XRH9	C3Y7E9	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.858
C3XRH9_BRAFL	C3Y7F0_BRAFL	C3XRH9	C3Y7F0	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.858
C3XRH9_BRAFL	C3Y917_BRAFL	C3XRH9	C3Y917	Nucleoporin_C domain-containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
C3XRH9_BRAFL	C3YJ29_BRAFL	C3XRH9	C3YJ29	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.989
C3XRH9_BRAFL	C3YJ30_BRAFL	C3XRH9	C3YJ30	Nucleoporin_C domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.995
C3XRH9_BRAFL	C3YM21_BRAFL	C3XRH9	C3YM21	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.993
C3XRH9_BRAFL	C3YVL3_BRAFL	C3XRH9	C3YVL3	Nucleoporin_C domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.999
C3XRH9_BRAFL	C3YXC1_BRAFL	C3XRH9	C3YXC1	Nucleoporin_C domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
C3XRH9_BRAFL	C3Z1R7_BRAFL	C3XRH9	C3Z1R7	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.995
C3XRH9_BRAFL	C3Z3J7_BRAFL	C3XRH9	C3Z3J7	Nucleoporin_C domain-containing protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.978
C3XRH9_BRAFL	C3Z4B2_BRAFL	C3XRH9	C3Z4B2	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.979
C3XRH9_BRAFL	C3Z810_BRAFL	C3XRH9	C3Z810	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.910
C3XRH9_BRAFL	C3ZBB9_BRAFL	C3XRH9	C3ZBB9	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.844
C3XRH9_BRAFL	C3ZBF7_BRAFL	C3XRH9	C3ZBF7	Nucleoporin_C domain-containing protein.	Nuclear pore protein.	0.992