(15 nodes) Pyroptosis network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Z6I2_BRAFL	Uncharacterized protein. (227 aa)
	C3ZE62_BRAFL	IRF tryptophan pentad repeat domain-containing protein. (134 aa)
	C3ZQ72_BRAFL	Uncharacterized protein. (173 aa)
	C3ZRS5_BRAFL	Uncharacterized protein. (212 aa)
	C3ZRT1_BRAFL	Uncharacterized protein. (150 aa)
	C3XTU6_BRAFL	Uncharacterized protein. (211 aa)
	C3XZX0_BRAFL	IRF tryptophan pentad repeat domain-containing protein. (132 aa)
	C3ZS91_BRAFL	Uncharacterized protein. (159 aa)
	C3XTH3_BRAFL	Uncharacterized protein. (217 aa)
	C3Y5U4_BRAFL	Uncharacterized protein. (1422 aa)
	C3Y9J2_BRAFL	IRF tryptophan pentad repeat domain-containing protein. (114 aa)
	C3YEP8_BRAFL	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (104 aa)
	C3YIV6_BRAFL	Uncharacterized protein. (222 aa)
	C3YWT1_BRAFL	Uncharacterized protein. (185 aa)
	C3Z391_BRAFL	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (111 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XTH3_BRAFL	C3XTU6_BRAFL	C3XTH3	C3XTU6	Uncharacterized protein.	Uncharacterized protein.	0.987
C3XTH3_BRAFL	C3Y5U4_BRAFL	C3XTH3	C3Y5U4	Uncharacterized protein.	Uncharacterized protein.	0.916
C3XTH3_BRAFL	C3YIV6_BRAFL	C3XTH3	C3YIV6	Uncharacterized protein.	Uncharacterized protein.	0.904
C3XTH3_BRAFL	C3YWT1_BRAFL	C3XTH3	C3YWT1	Uncharacterized protein.	Uncharacterized protein.	0.940
C3XTH3_BRAFL	C3Z6I2_BRAFL	C3XTH3	C3Z6I2	Uncharacterized protein.	Uncharacterized protein.	0.990
C3XTH3_BRAFL	C3ZS91_BRAFL	C3XTH3	C3ZS91	Uncharacterized protein.	Uncharacterized protein.	0.903
C3XTU6_BRAFL	C3XTH3_BRAFL	C3XTU6	C3XTH3	Uncharacterized protein.	Uncharacterized protein.	0.987
C3XTU6_BRAFL	C3Y5U4_BRAFL	C3XTU6	C3Y5U4	Uncharacterized protein.	Uncharacterized protein.	0.966
C3XTU6_BRAFL	C3YIV6_BRAFL	C3XTU6	C3YIV6	Uncharacterized protein.	Uncharacterized protein.	0.987
C3XTU6_BRAFL	C3YWT1_BRAFL	C3XTU6	C3YWT1	Uncharacterized protein.	Uncharacterized protein.	0.994
C3XTU6_BRAFL	C3Z6I2_BRAFL	C3XTU6	C3Z6I2	Uncharacterized protein.	Uncharacterized protein.	0.995
C3XTU6_BRAFL	C3ZS91_BRAFL	C3XTU6	C3ZS91	Uncharacterized protein.	Uncharacterized protein.	0.945
C3XZX0_BRAFL	C3ZE62_BRAFL	C3XZX0	C3ZE62	IRF tryptophan pentad repeat domain-containing protein.	IRF tryptophan pentad repeat domain-containing protein.	0.737
C3Y5U4_BRAFL	C3XTH3_BRAFL	C3Y5U4	C3XTH3	Uncharacterized protein.	Uncharacterized protein.	0.916
C3Y5U4_BRAFL	C3XTU6_BRAFL	C3Y5U4	C3XTU6	Uncharacterized protein.	Uncharacterized protein.	0.966
C3Y5U4_BRAFL	C3YIV6_BRAFL	C3Y5U4	C3YIV6	Uncharacterized protein.	Uncharacterized protein.	0.916
C3Y5U4_BRAFL	C3YWT1_BRAFL	C3Y5U4	C3YWT1	Uncharacterized protein.	Uncharacterized protein.	0.960
C3Y5U4_BRAFL	C3Z6I2_BRAFL	C3Y5U4	C3Z6I2	Uncharacterized protein.	Uncharacterized protein.	0.962
C3Y5U4_BRAFL	C3ZS91_BRAFL	C3Y5U4	C3ZS91	Uncharacterized protein.	Uncharacterized protein.	0.886
C3YEP8_BRAFL	C3ZQ72_BRAFL	C3YEP8	C3ZQ72	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein.	0.703