20 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Z899_BRAFL	AAA domain-containing protein. (364 aa)
	C3YZR5_BRAFL	Uncharacterized protein. (600 aa)
	C3YUN6_BRAFL	Uncharacterized protein. (118 aa)
	C3YI97_BRAFL	DNA_pol_B_exo1 domain-containing protein. (222 aa)
	C3YI96_BRAFL	DNA polymerase. (813 aa)
	C3YDK8_BRAFL	AAA domain-containing protein. (362 aa)
	C3YBI7_BRAFL	UmuC domain-containing protein. (493 aa)
	C3Y9A3_BRAFL	ATPase_AAA_core domain-containing protein. (2025 aa)
	C3Y6K1_BRAFL	Uncharacterized protein. (1191 aa)
	C3Y4Y4_BRAFL	Uncharacterized protein. (223 aa)
	C3Y4Y3_BRAFL	BRCT domain-containing protein. (756 aa)
	C3Y2C9_BRAFL	Uncharacterized protein. (609 aa)
	C3XXK6_BRAFL	AAA domain-containing protein. (356 aa)
	C3ZVR8_BRAFL	HORMA domain-containing protein. (224 aa)
	C3ZVP5_BRAFL	Uncharacterized protein. (355 aa)
	C3ZRF2_BRAFL	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
	C3ZL26_BRAFL	AAA domain-containing protein. (329 aa)
	C3ZHV9_BRAFL	Uncharacterized protein. (256 aa)
	C3ZHV8_BRAFL	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (265 aa)
	C3ZFB5_BRAFL	BTB domain-containing protein. (538 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XXK6_BRAFL	C3Y2C9_BRAFL	C3XXK6	C3Y2C9	AAA domain-containing protein.	Uncharacterized protein.	0.602
C3XXK6_BRAFL	C3Y4Y3_BRAFL	C3XXK6	C3Y4Y3	AAA domain-containing protein.	BRCT domain-containing protein.	0.986
C3XXK6_BRAFL	C3Y4Y4_BRAFL	C3XXK6	C3Y4Y4	AAA domain-containing protein.	Uncharacterized protein.	0.979
C3XXK6_BRAFL	C3Y6K1_BRAFL	C3XXK6	C3Y6K1	AAA domain-containing protein.	Uncharacterized protein.	0.736
C3XXK6_BRAFL	C3Y9A3_BRAFL	C3XXK6	C3Y9A3	AAA domain-containing protein.	ATPase_AAA_core domain-containing protein.	0.989
C3XXK6_BRAFL	C3YBI7_BRAFL	C3XXK6	C3YBI7	AAA domain-containing protein.	UmuC domain-containing protein.	0.733
C3XXK6_BRAFL	C3YDK8_BRAFL	C3XXK6	C3YDK8	AAA domain-containing protein.	AAA domain-containing protein.	0.999
C3XXK6_BRAFL	C3YI96_BRAFL	C3XXK6	C3YI96	AAA domain-containing protein.	DNA polymerase.	0.704
C3XXK6_BRAFL	C3YI97_BRAFL	C3XXK6	C3YI97	AAA domain-containing protein.	DNA_pol_B_exo1 domain-containing protein.	0.704
C3XXK6_BRAFL	C3YUN6_BRAFL	C3XXK6	C3YUN6	AAA domain-containing protein.	Uncharacterized protein.	0.749
C3XXK6_BRAFL	C3YZR5_BRAFL	C3XXK6	C3YZR5	AAA domain-containing protein.	Uncharacterized protein.	0.602
C3XXK6_BRAFL	C3Z899_BRAFL	C3XXK6	C3Z899	AAA domain-containing protein.	AAA domain-containing protein.	0.999
C3XXK6_BRAFL	C3ZHV8_BRAFL	C3XXK6	C3ZHV8	AAA domain-containing protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.784
C3XXK6_BRAFL	C3ZHV9_BRAFL	C3XXK6	C3ZHV9	AAA domain-containing protein.	Uncharacterized protein.	0.719
C3XXK6_BRAFL	C3ZL26_BRAFL	C3XXK6	C3ZL26	AAA domain-containing protein.	AAA domain-containing protein.	0.999
C3XXK6_BRAFL	C3ZRF2_BRAFL	C3XXK6	C3ZRF2	AAA domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.999
C3XXK6_BRAFL	C3ZVP5_BRAFL	C3XXK6	C3ZVP5	AAA domain-containing protein.	Uncharacterized protein.	0.651
C3XXK6_BRAFL	C3ZVR8_BRAFL	C3XXK6	C3ZVR8	AAA domain-containing protein.	HORMA domain-containing protein.	0.710
C3Y2C9_BRAFL	C3XXK6_BRAFL	C3Y2C9	C3XXK6	Uncharacterized protein.	AAA domain-containing protein.	0.602
C3Y2C9_BRAFL	C3Y4Y3_BRAFL	C3Y2C9	C3Y4Y3	Uncharacterized protein.	BRCT domain-containing protein.	0.475