STRINGSTRING
C3ZB54_BRAFL C3ZB54_BRAFL C3ZA86_BRAFL C3ZA86_BRAFL C3Z9J2_BRAFL C3Z9J2_BRAFL C3Z9E7_BRAFL C3Z9E7_BRAFL C3Z8E0_BRAFL C3Z8E0_BRAFL C3Z899_BRAFL C3Z899_BRAFL C3Z7P4_BRAFL C3Z7P4_BRAFL C3Z7L1_BRAFL C3Z7L1_BRAFL UBE2S_BRAFL UBE2S_BRAFL C3Z568_BRAFL C3Z568_BRAFL C3Z4T9_BRAFL C3Z4T9_BRAFL C3Z3L7_BRAFL C3Z3L7_BRAFL C3Z3L5_BRAFL C3Z3L5_BRAFL C3Z346_BRAFL C3Z346_BRAFL C3Z2M9_BRAFL C3Z2M9_BRAFL C3Z2M7_BRAFL C3Z2M7_BRAFL C3Z0Z0_BRAFL C3Z0Z0_BRAFL C3Z068_BRAFL C3Z068_BRAFL C3Z060_BRAFL C3Z060_BRAFL C3YZV0_BRAFL C3YZV0_BRAFL C3YZR5_BRAFL C3YZR5_BRAFL C3YZJ9_BRAFL C3YZJ9_BRAFL C3YYS3_BRAFL C3YYS3_BRAFL C3YYK3_BRAFL C3YYK3_BRAFL C3YYJ5_BRAFL C3YYJ5_BRAFL C3YW11_BRAFL C3YW11_BRAFL C3YUN6_BRAFL C3YUN6_BRAFL C3YTV7_BRAFL C3YTV7_BRAFL C3YQ31_BRAFL C3YQ31_BRAFL C3YP57_BRAFL C3YP57_BRAFL C3YM20_BRAFL C3YM20_BRAFL C3YL40_BRAFL C3YL40_BRAFL C3YK31_BRAFL C3YK31_BRAFL C3YIL9_BRAFL C3YIL9_BRAFL C3YIF0_BRAFL C3YIF0_BRAFL C3YGW3_BRAFL C3YGW3_BRAFL C3YGH8_BRAFL C3YGH8_BRAFL C3YEU3_BRAFL C3YEU3_BRAFL C3YEL7_BRAFL C3YEL7_BRAFL C3YEL6_BRAFL C3YEL6_BRAFL C3YEG7_BRAFL C3YEG7_BRAFL C3YEG2_BRAFL C3YEG2_BRAFL C3YDQ6_BRAFL C3YDQ6_BRAFL C3YDK8_BRAFL C3YDK8_BRAFL C3YCQ9_BRAFL C3YCQ9_BRAFL C3YBG7_BRAFL C3YBG7_BRAFL C3YB87_BRAFL C3YB87_BRAFL C3YAI9_BRAFL C3YAI9_BRAFL C3YAA1_BRAFL C3YAA1_BRAFL C3Y9V2_BRAFL C3Y9V2_BRAFL C3Y9F3_BRAFL C3Y9F3_BRAFL C3Y9A3_BRAFL C3Y9A3_BRAFL C3Y895_BRAFL C3Y895_BRAFL C3Y5T5_BRAFL C3Y5T5_BRAFL C3Y5L7_BRAFL C3Y5L7_BRAFL C3Y5K6_BRAFL C3Y5K6_BRAFL C3Y542_BRAFL C3Y542_BRAFL C3Y4Y4_BRAFL C3Y4Y4_BRAFL C3Y4Y3_BRAFL C3Y4Y3_BRAFL C3Y3Y6_BRAFL C3Y3Y6_BRAFL C3Y3A4_BRAFL C3Y3A4_BRAFL C3Y322_BRAFL C3Y322_BRAFL C3Y2C9_BRAFL C3Y2C9_BRAFL C3Y0U6_BRAFL C3Y0U6_BRAFL C3Y0R7_BRAFL C3Y0R7_BRAFL C3Y0L2_BRAFL C3Y0L2_BRAFL C3Y0B8_BRAFL C3Y0B8_BRAFL C3XZT5_BRAFL C3XZT5_BRAFL C3XZ66_BRAFL C3XZ66_BRAFL C3XYM1_BRAFL C3XYM1_BRAFL C3XXY6_BRAFL C3XXY6_BRAFL C3XXN0_BRAFL C3XXN0_BRAFL C3XXK6_BRAFL C3XXK6_BRAFL C3XVA8_BRAFL C3XVA8_BRAFL C3XTX5_BRAFL C3XTX5_BRAFL C3XSS5_BRAFL C3XSS5_BRAFL C3XS01_BRAFL C3XS01_BRAFL C3XR78_BRAFL C3XR78_BRAFL C3ZB79_BRAFL C3ZB79_BRAFL C3ZB80_BRAFL C3ZB80_BRAFL C3ZBI1_BRAFL C3ZBI1_BRAFL C3ZBI7_BRAFL C3ZBI7_BRAFL C3ZBI8_BRAFL C3ZBI8_BRAFL FEN1 FEN1 C3ZBU1_BRAFL C3ZBU1_BRAFL C3ZD95_BRAFL C3ZD95_BRAFL C3ZEE6_BRAFL C3ZEE6_BRAFL MCM7 MCM7 MCM7-2 MCM7-2 C3ZEX5_BRAFL C3ZEX5_BRAFL C3ZF97_BRAFL C3ZF97_BRAFL C3ZFB5_BRAFL C3ZFB5_BRAFL C3ZFR4_BRAFL C3ZFR4_BRAFL C3ZHV8_BRAFL C3ZHV8_BRAFL C3ZHV9_BRAFL C3ZHV9_BRAFL C3ZI15_BRAFL C3ZI15_BRAFL C3ZIC3_BRAFL C3ZIC3_BRAFL Hsd11b1F Hsd11b1F C3ZJN9_BRAFL C3ZJN9_BRAFL C3ZKU4_BRAFL C3ZKU4_BRAFL C3ZL26_BRAFL C3ZL26_BRAFL C3ZLJ0_BRAFL C3ZLJ0_BRAFL C3ZLP9_BRAFL C3ZLP9_BRAFL C3ZN04_BRAFL C3ZN04_BRAFL C3ZN90_BRAFL C3ZN90_BRAFL C3ZPM6_BRAFL C3ZPM6_BRAFL C3ZPP8_BRAFL C3ZPP8_BRAFL C3ZPW4_BRAFL C3ZPW4_BRAFL C3ZPX9_BRAFL C3ZPX9_BRAFL C3ZR59_BRAFL C3ZR59_BRAFL C3ZRF2_BRAFL C3ZRF2_BRAFL C3ZS90_BRAFL C3ZS90_BRAFL C3ZSS5_BRAFL C3ZSS5_BRAFL C3ZT90_BRAFL C3ZT90_BRAFL C3ZWY4_BRAFL C3ZWY4_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3ZB54_BRAFLDNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (183 aa)
C3ZA86_BRAFLPCI domain-containing protein. (389 aa)
C3Z9J2_BRAFLUncharacterized protein. (337 aa)
C3Z9E7_BRAFLProteasome subunit beta. (235 aa)
C3Z8E0_BRAFLPCI domain-containing protein. (512 aa)
C3Z899_BRAFLAAA domain-containing protein. (364 aa)
C3Z7P4_BRAFLDNA ligase. (952 aa)
C3Z7L1_BRAFLPCI domain-containing protein. (452 aa)
UBE2S_BRAFLUbiquitin-conjugating enzyme E2 S; Catalyzes the covalent attachment of ubiquitin to other proteins. Acts as an essential factor of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated ubiquitin ligase that controls progression through mitosis. Acts by specifically elongating polyubiquitin chains initiated by the E2 enzyme UBCH10 on APC/C substrates, enhancing the degradation of APC/C substrates by the proteasome and promoting mitotic exit. (213 aa)
C3Z568_BRAFLProteasome subunit beta. (276 aa)
C3Z4T9_BRAFLDNA helicase; Belongs to the MCM family. (731 aa)
C3Z3L7_BRAFLPCI domain-containing protein. (256 aa)
C3Z3L5_BRAFLAAA domain-containing protein; Belongs to the AAA ATPase family. (392 aa)
C3Z346_BRAFLProteasome subunit alpha type. (262 aa)
C3Z2M9_BRAFLAAA_16 domain-containing protein. (227 aa)
C3Z2M7_BRAFLAAA_16 domain-containing protein. (456 aa)
C3Z0Z0_BRAFLProteasome subunit alpha type. (252 aa)
C3Z068_BRAFLGLTSCR1 domain-containing protein. (1731 aa)
C3Z060_BRAFLOrigin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (397 aa)
C3YZV0_BRAFLCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (320 aa)
C3YZR5_BRAFLUncharacterized protein. (600 aa)
C3YZJ9_BRAFLAnaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (181 aa)
C3YYS3_BRAFLCell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (598 aa)
C3YYK3_BRAFLTPR_REGION domain-containing protein. (854 aa)
C3YYJ5_BRAFLUncharacterized protein. (492 aa)
C3YW11_BRAFLProteasome subunit beta. (205 aa)
C3YUN6_BRAFLUncharacterized protein. (118 aa)
C3YTV7_BRAFLCULLIN_2 domain-containing protein; Belongs to the cullin family. (818 aa)
C3YQ31_BRAFLDNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (474 aa)
C3YP57_BRAFLUncharacterized protein; Belongs to the SKP1 family. (196 aa)
C3YM20_BRAFLF-box domain-containing protein. (421 aa)
C3YL40_BRAFLDNA helicase; Belongs to the MCM family. (816 aa)
C3YK31_BRAFLUncharacterized protein. (537 aa)
C3YIL9_BRAFLMCM domain-containing protein; Belongs to the MCM family. (678 aa)
C3YIF0_BRAFLUncharacterized protein. (721 aa)
C3YGW3_BRAFLUncharacterized protein. (1825 aa)
C3YGH8_BRAFLUncharacterized protein. (250 aa)
C3YEU3_BRAFLDNA primase; Belongs to the eukaryotic-type primase small subunit family. (372 aa)
C3YEL7_BRAFLDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (540 aa)
C3YEL6_BRAFLDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (579 aa)
C3YEG7_BRAFLUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (181 aa)
C3YEG2_BRAFLANK_REP_REGION domain-containing protein. (93 aa)
C3YDQ6_BRAFLProteasome subunit beta; Belongs to the peptidase T1B family. (258 aa)
C3YDK8_BRAFLAAA domain-containing protein. (362 aa)
C3YCQ9_BRAFLUncharacterized protein. (545 aa)
C3YBG7_BRAFLRING-type domain-containing protein. (89 aa)
C3YB87_BRAFLCULLIN_2 domain-containing protein; Belongs to the cullin family. (771 aa)
C3YAI9_BRAFLDNA helicase; Belongs to the MCM family. (892 aa)
C3YAA1_BRAFLUncharacterized protein. (521 aa)
C3Y9V2_BRAFLCBFD_NFYB_HMF domain-containing protein. (115 aa)
C3Y9F3_BRAFLUncharacterized protein. (449 aa)
C3Y9A3_BRAFLATPase_AAA_core domain-containing protein. (2025 aa)
C3Y895_BRAFLAAA domain-containing protein; Belongs to the AAA ATPase family. (407 aa)
C3Y5T5_BRAFLVWFA domain-containing protein. (401 aa)
C3Y5L7_BRAFLAAA domain-containing protein; Belongs to the AAA ATPase family. (417 aa)
C3Y5K6_BRAFLDNA polymerase. (1286 aa)
C3Y542_BRAFLDUF4203 domain-containing protein. (513 aa)
C3Y4Y4_BRAFLUncharacterized protein. (223 aa)
C3Y4Y3_BRAFLBRCT domain-containing protein. (756 aa)
C3Y3Y6_BRAFLUncharacterized protein. (675 aa)
C3Y3A4_BRAFLUncharacterized protein. (110 aa)
C3Y322_BRAFLUncharacterized protein. (503 aa)
C3Y2C9_BRAFLUncharacterized protein. (609 aa)
C3Y0U6_BRAFLMCM domain-containing protein; Belongs to the MCM family. (844 aa)
C3Y0R7_BRAFLANAPC5 domain-containing protein. (747 aa)
C3Y0L2_BRAFLAPC1_C domain-containing protein. (2078 aa)
C3Y0B8_BRAFLProteasome subunit alpha type. (255 aa)
C3XZT5_BRAFLDNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (189 aa)
C3XZ66_BRAFLProteasome subunit alpha type. (246 aa)
C3XYM1_BRAFLAAA domain-containing protein; Belongs to the AAA ATPase family. (433 aa)
C3XXY6_BRAFLMPN domain-containing protein. (311 aa)
C3XXN0_BRAFLRING-type domain-containing protein. (111 aa)
C3XXK6_BRAFLAAA domain-containing protein. (356 aa)
C3XVA8_BRAFLUncharacterized protein. (115 aa)
C3XTX5_BRAFLSld5 domain-containing protein. (207 aa)
C3XSS5_BRAFLProteasome subunit alpha type. (212 aa)
C3XS01_BRAFLAAA domain-containing protein; Belongs to the AAA ATPase family. (441 aa)
C3XR78_BRAFLSld5 domain-containing protein. (196 aa)
C3ZB79_BRAFLMCM domain-containing protein; Belongs to the MCM family. (473 aa)
C3ZB80_BRAFLUncharacterized protein. (354 aa)
C3ZBI1_BRAFLMPN domain-containing protein. (337 aa)
C3ZBI7_BRAFLUncharacterized protein. (135 aa)
C3ZBI8_BRAFLUncharacterized protein. (113 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
C3ZBU1_BRAFLCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (412 aa)
C3ZD95_BRAFLUncharacterized protein. (499 aa)
C3ZEE6_BRAFLDNA polymerase. (1526 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (279 aa)
MCM7-2DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (457 aa)
C3ZEX5_BRAFLUncharacterized protein. (130 aa)
C3ZF97_BRAFL26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (959 aa)
C3ZFB5_BRAFLBTB domain-containing protein. (538 aa)
C3ZFR4_BRAFLOrigin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (1032 aa)
C3ZHV8_BRAFLReplication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (265 aa)
C3ZHV9_BRAFLUncharacterized protein. (256 aa)
C3ZI15_BRAFLProteasome subunit beta. (201 aa)
C3ZIC3_BRAFLProteasome subunit beta. (232 aa)
Hsd11b1FPDZ domain-containing protein. (199 aa)
C3ZJN9_BRAFLUncharacterized protein. (1786 aa)
C3ZKU4_BRAFLUncharacterized protein. (103 aa)
C3ZL26_BRAFLAAA domain-containing protein. (329 aa)
C3ZLJ0_BRAFLORC_WH_C domain-containing protein. (875 aa)
C3ZLP9_BRAFLTPR_REGION domain-containing protein. (575 aa)
C3ZN04_BRAFLDNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (541 aa)
C3ZN90_BRAFLUncharacterized protein. (285 aa)
C3ZPM6_BRAFLPCI domain-containing protein. (427 aa)
C3ZPP8_BRAFLProteasome subunit alpha type. (241 aa)
C3ZPW4_BRAFLUncharacterized protein. (213 aa)
C3ZPX9_BRAFLPCI domain-containing protein. (377 aa)
C3ZR59_BRAFLAAA domain-containing protein; Belongs to the AAA ATPase family. (405 aa)
C3ZRF2_BRAFLProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
C3ZS90_BRAFLANK_REP_REGION domain-containing protein. (145 aa)
C3ZSS5_BRAFLDNA helicase; Belongs to the MCM family. (690 aa)
C3ZT90_BRAFLUncharacterized protein. (410 aa)
C3ZWY4_BRAFLCBFD_NFYB_HMF domain-containing protein. (153 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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