STRINGSTRING
C3XQS8_BRAFL C3XQS8_BRAFL C3XTH2_BRAFL C3XTH2_BRAFL C3XWP7_BRAFL C3XWP7_BRAFL C3XZY0_BRAFL C3XZY0_BRAFL C3Y091_BRAFL C3Y091_BRAFL C3Y0C1_BRAFL C3Y0C1_BRAFL C3Y0H1_BRAFL C3Y0H1_BRAFL C3Y1G6_BRAFL C3Y1G6_BRAFL C3Y1X1_BRAFL C3Y1X1_BRAFL C3Y3C6_BRAFL C3Y3C6_BRAFL C3Y5M2_BRAFL C3Y5M2_BRAFL C3Y645_BRAFL C3Y645_BRAFL C3Y693_BRAFL C3Y693_BRAFL C3Y8Y7_BRAFL C3Y8Y7_BRAFL C3YBY7_BRAFL C3YBY7_BRAFL C3YD69_BRAFL C3YD69_BRAFL C3YH75_BRAFL C3YH75_BRAFL C3YID2_BRAFL C3YID2_BRAFL C3YIV1_BRAFL C3YIV1_BRAFL C3YN18_BRAFL C3YN18_BRAFL C3YRK8_BRAFL C3YRK8_BRAFL C3YRK9_BRAFL C3YRK9_BRAFL C3YTK8_BRAFL C3YTK8_BRAFL C3YVZ4_BRAFL C3YVZ4_BRAFL C3YW52_BRAFL C3YW52_BRAFL C3YWC7_BRAFL C3YWC7_BRAFL C3Z3J6_BRAFL C3Z3J6_BRAFL C3Z5Q6_BRAFL C3Z5Q6_BRAFL C3Z749_BRAFL C3Z749_BRAFL C3Z762_BRAFL C3Z762_BRAFL C3Z766_BRAFL C3Z766_BRAFL C3Z773_BRAFL C3Z773_BRAFL C3Z775_BRAFL C3Z775_BRAFL C3Z787_BRAFL C3Z787_BRAFL C3Z789_BRAFL C3Z789_BRAFL C3Z795_BRAFL C3Z795_BRAFL C3Z7A1_BRAFL C3Z7A1_BRAFL C3Z7B0_BRAFL C3Z7B0_BRAFL C3Z7D0_BRAFL C3Z7D0_BRAFL C3Z7D4_BRAFL C3Z7D4_BRAFL C3Z7F0_BRAFL C3Z7F0_BRAFL C3Z7G5_BRAFL C3Z7G5_BRAFL C3Z879_BRAFL C3Z879_BRAFL C3Z883_BRAFL C3Z883_BRAFL C3ZAQ3_BRAFL C3ZAQ3_BRAFL C3ZBW5_BRAFL C3ZBW5_BRAFL C3ZCV2_BRAFL C3ZCV2_BRAFL C3ZJR0_BRAFL C3ZJR0_BRAFL C3ZLN6_BRAFL C3ZLN6_BRAFL C3ZQF0_BRAFL C3ZQF0_BRAFL C3ZT09_BRAFL C3ZT09_BRAFL C3ZTV2_BRAFL C3ZTV2_BRAFL C3ZW08_BRAFL C3ZW08_BRAFL C3ZYM4_BRAFL C3ZYM4_BRAFL C4A021_BRAFL C4A021_BRAFL C4A0W1_BRAFL C4A0W1_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XQS8_BRAFLHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
C3XTH2_BRAFLHistone H2B; Belongs to the histone H2B family. (131 aa)
C3XWP7_BRAFLSprT-like domain-containing protein. (658 aa)
C3XZY0_BRAFLHistone H2A; Belongs to the histone H2A family. (128 aa)
C3Y091_BRAFLUncharacterized protein. (706 aa)
C3Y0C1_BRAFLUncharacterized protein. (320 aa)
C3Y0H1_BRAFLHelicase ATP-binding domain-containing protein. (763 aa)
C3Y1G6_BRAFLP66_CC domain-containing protein. (484 aa)
C3Y1X1_BRAFLMBD domain-containing protein. (298 aa)
C3Y3C6_BRAFLUncharacterized protein. (376 aa)
C3Y5M2_BRAFLUncharacterized protein. (390 aa)
C3Y645_BRAFLUncharacterized protein. (68 aa)
C3Y693_BRAFLUncharacterized protein. (551 aa)
C3Y8Y7_BRAFLHistone H2B; Belongs to the histone H2B family. (129 aa)
C3YBY7_BRAFLUncharacterized protein. (798 aa)
C3YD69_BRAFLUncharacterized protein. (573 aa)
C3YH75_BRAFLUncharacterized protein. (129 aa)
C3YID2_BRAFLWD_REPEATS_REGION domain-containing protein. (187 aa)
C3YIV1_BRAFLRRN7-type domain-containing protein. (628 aa)
C3YN18_BRAFLGeneral transcription factor IIH subunit. (396 aa)
C3YRK8_BRAFLUncharacterized protein. (964 aa)
C3YRK9_BRAFLCHDCT2 domain-containing protein. (254 aa)
C3YTK8_BRAFLGeneral transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (457 aa)
C3YVZ4_BRAFLHistone domain-containing protein; Belongs to the histone H2B family. (151 aa)
C3YW52_BRAFLDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1140 aa)
C3YWC7_BRAFLHistone H2B; Belongs to the histone H2B family. (122 aa)
C3Z3J6_BRAFLRPOLD domain-containing protein. (290 aa)
C3Z5Q6_BRAFLUncharacterized protein. (71 aa)
C3Z749_BRAFLUncharacterized protein. (1464 aa)
C3Z762_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3Z766_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3Z773_BRAFLHistone H2B; Belongs to the histone H2B family. (121 aa)
C3Z775_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3Z787_BRAFLHistone H2B; Belongs to the histone H2B family. (121 aa)
C3Z789_BRAFLHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
C3Z795_BRAFLHistone H2B; Belongs to the histone H2B family. (110 aa)
C3Z7A1_BRAFLHistone H2B; Belongs to the histone H2B family. (98 aa)
C3Z7B0_BRAFLHistone H2B; Belongs to the histone H2B family. (118 aa)
C3Z7D0_BRAFLHistone domain-containing protein; Belongs to the histone H2B family. (122 aa)
C3Z7D4_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3Z7F0_BRAFLHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (220 aa)
C3Z7G5_BRAFLUncharacterized protein. (548 aa)
C3Z879_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3Z883_BRAFLHistone H2B; Belongs to the histone H2B family. (283 aa)
C3ZAQ3_BRAFLUncharacterized protein. (295 aa)
C3ZBW5_BRAFLDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1731 aa)
C3ZCV2_BRAFLUncharacterized protein. (205 aa)
C3ZJR0_BRAFLHistone domain-containing protein; Belongs to the histone H2B family. (120 aa)
C3ZLN6_BRAFLUncharacterized protein. (162 aa)
C3ZQF0_BRAFLUncharacterized protein. (210 aa)
C3ZT09_BRAFLCYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
C3ZTV2_BRAFLHistone H2B; Belongs to the histone H2B family. (67 aa)
C3ZW08_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3ZYM4_BRAFLHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
C4A021_BRAFLWD_REPEATS_REGION domain-containing protein. (429 aa)
C4A0W1_BRAFLCYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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