STRINGSTRING
C3Y7R6_BRAFL C3Y7R6_BRAFL C4A021_BRAFL C4A021_BRAFL C3ZZH4_BRAFL C3ZZH4_BRAFL C3ZYM4_BRAFL C3ZYM4_BRAFL C3ZW08_BRAFL C3ZW08_BRAFL C3ZUJ7_BRAFL C3ZUJ7_BRAFL C3ZUG4_BRAFL C3ZUG4_BRAFL C3ZUG2_BRAFL C3ZUG2_BRAFL C3ZUG1_BRAFL C3ZUG1_BRAFL C3ZTV2_BRAFL C3ZTV2_BRAFL C3ZTJ4_BRAFL C3ZTJ4_BRAFL C3ZT90_BRAFL C3ZT90_BRAFL C3ZRF2_BRAFL C3ZRF2_BRAFL C3ZR83_BRAFL C3ZR83_BRAFL C3ZQ21_BRAFL C3ZQ21_BRAFL C3ZPA3_BRAFL C3ZPA3_BRAFL C3ZL26_BRAFL C3ZL26_BRAFL C3ZJW1_BRAFL C3ZJW1_BRAFL C3ZJR0_BRAFL C3ZJR0_BRAFL C3ZHV9_BRAFL C3ZHV9_BRAFL C3ZHV8_BRAFL C3ZHV8_BRAFL C3ZHI0_BRAFL C3ZHI0_BRAFL C3ZG26_BRAFL C3ZG26_BRAFL C3ZFB5_BRAFL C3ZFB5_BRAFL C3ZFB0_BRAFL C3ZFB0_BRAFL C3ZF60_BRAFL C3ZF60_BRAFL C3ZEE6_BRAFL C3ZEE6_BRAFL C3ZEC9_BRAFL C3ZEC9_BRAFL C3ZE81_BRAFL C3ZE81_BRAFL C3ZD95_BRAFL C3ZD95_BRAFL FEN1 FEN1 C3ZBQ9_BRAFL C3ZBQ9_BRAFL C3ZBB4_BRAFL C3ZBB4_BRAFL C3ZAS8_BRAFL C3ZAS8_BRAFL C3ZAS6_BRAFL C3ZAS6_BRAFL C3Z899_BRAFL C3Z899_BRAFL C3Z883_BRAFL C3Z883_BRAFL C3Z879_BRAFL C3Z879_BRAFL C3Z7P4_BRAFL C3Z7P4_BRAFL C3Z7J9_BRAFL C3Z7J9_BRAFL C3Z7G6_BRAFL C3Z7G6_BRAFL C3Z7F0_BRAFL C3Z7F0_BRAFL C3Z7D4_BRAFL C3Z7D4_BRAFL C3Z7D0_BRAFL C3Z7D0_BRAFL C3Z7B0_BRAFL C3Z7B0_BRAFL C3Z7A1_BRAFL C3Z7A1_BRAFL C3Z795_BRAFL C3Z795_BRAFL C3Z789_BRAFL C3Z789_BRAFL C3Z787_BRAFL C3Z787_BRAFL C3Z775_BRAFL C3Z775_BRAFL C3Z773_BRAFL C3Z773_BRAFL C3Z766_BRAFL C3Z766_BRAFL C3Z762_BRAFL C3Z762_BRAFL C3Z6I4_BRAFL C3Z6I4_BRAFL C3Z5X3_BRAFL C3Z5X3_BRAFL C3Z3N5_BRAFL C3Z3N5_BRAFL C3Z296_BRAFL C3Z296_BRAFL C3Z1Z1_BRAFL C3Z1Z1_BRAFL C3YZV0_BRAFL C3YZV0_BRAFL C3YZR1_BRAFL C3YZR1_BRAFL C3YZR0_BRAFL C3YZR0_BRAFL C3YZM5_BRAFL C3YZM5_BRAFL C3YXD2_BRAFL C3YXD2_BRAFL C3YXB5_BRAFL C3YXB5_BRAFL C3YWC7_BRAFL C3YWC7_BRAFL C3YVZ4_BRAFL C3YVZ4_BRAFL C3YV14_BRAFL C3YV14_BRAFL C3YV12_BRAFL C3YV12_BRAFL C3YV10_BRAFL C3YV10_BRAFL C3YV08_BRAFL C3YV08_BRAFL C3YV06_BRAFL C3YV06_BRAFL C3YUN6_BRAFL C3YUN6_BRAFL C3YTH1_BRAFL C3YTH1_BRAFL C3YQ31_BRAFL C3YQ31_BRAFL C3YNS7_BRAFL C3YNS7_BRAFL C3YMK5_BRAFL C3YMK5_BRAFL C3YLP2_BRAFL C3YLP2_BRAFL C3YKR1_BRAFL C3YKR1_BRAFL C3YII8_BRAFL C3YII8_BRAFL C3YID2_BRAFL C3YID2_BRAFL C3YEU3_BRAFL C3YEU3_BRAFL C3YDK8_BRAFL C3YDK8_BRAFL C3YD16_BRAFL C3YD16_BRAFL C3YBV3_BRAFL C3YBV3_BRAFL C3YBV2_BRAFL C3YBV2_BRAFL C3YAB6_BRAFL C3YAB6_BRAFL C3YAA1_BRAFL C3YAA1_BRAFL C3Y9F3_BRAFL C3Y9F3_BRAFL C3Y8Y7_BRAFL C3Y8Y7_BRAFL C3Y8N4_BRAFL C3Y8N4_BRAFL C3Y6A4_BRAFL C3Y6A4_BRAFL C3Y5K6_BRAFL C3Y5K6_BRAFL C3Y522_BRAFL C3Y522_BRAFL C3Y4Y4_BRAFL C3Y4Y4_BRAFL C3Y4Y3_BRAFL C3Y4Y3_BRAFL C3Y4R4_BRAFL C3Y4R4_BRAFL C3Y462_BRAFL C3Y462_BRAFL C3Y221_BRAFL C3Y221_BRAFL C3Y1W8_BRAFL C3Y1W8_BRAFL C3Y1F4_BRAFL C3Y1F4_BRAFL C3XZY0_BRAFL C3XZY0_BRAFL C3XXK6_BRAFL C3XXK6_BRAFL C3XVA8_BRAFL C3XVA8_BRAFL C3XU84_BRAFL C3XU84_BRAFL C3XTW9_BRAFL C3XTW9_BRAFL C3XTH2_BRAFL C3XTH2_BRAFL C3XT78_BRAFL C3XT78_BRAFL C3XQS8_BRAFL C3XQS8_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3Y7R6_BRAFLPUA domain-containing protein. (470 aa)
C4A021_BRAFLWD_REPEATS_REGION domain-containing protein. (429 aa)
C3ZZH4_BRAFLUncharacterized protein. (541 aa)
C3ZYM4_BRAFLHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
C3ZW08_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3ZUJ7_BRAFLUncharacterized protein. (76 aa)
C3ZUG4_BRAFLSANT domain-containing protein. (407 aa)
C3ZUG2_BRAFLHelicase ATP-binding domain-containing protein. (436 aa)
C3ZUG1_BRAFLUncharacterized protein; Belongs to the PDGF/VEGF growth factor family. (626 aa)
C3ZTV2_BRAFLHistone H2B; Belongs to the histone H2B family. (67 aa)
C3ZTJ4_BRAFLUncharacterized protein. (502 aa)
C3ZT90_BRAFLUncharacterized protein. (410 aa)
C3ZRF2_BRAFLProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
C3ZR83_BRAFLUncharacterized protein. (459 aa)
C3ZQ21_BRAFLHTH myb-type domain-containing protein. (55 aa)
C3ZPA3_BRAFLDaxx domain-containing protein. (323 aa)
C3ZL26_BRAFLAAA domain-containing protein. (329 aa)
C3ZJW1_BRAFLATPase_AAA_core domain-containing protein. (345 aa)
C3ZJR0_BRAFLHistone domain-containing protein; Belongs to the histone H2B family. (120 aa)
C3ZHV9_BRAFLUncharacterized protein. (256 aa)
C3ZHV8_BRAFLReplication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (265 aa)
C3ZHI0_BRAFLHelicase ATP-binding domain-containing protein. (504 aa)
C3ZG26_BRAFLSerine/threonine-protein phosphatase. (304 aa)
C3ZFB5_BRAFLBTB domain-containing protein. (538 aa)
C3ZFB0_BRAFLWHIM1 domain-containing protein. (190 aa)
C3ZF60_BRAFLWD_REPEATS_REGION domain-containing protein. (434 aa)
C3ZEE6_BRAFLDNA polymerase. (1526 aa)
C3ZEC9_BRAFLUncharacterized protein. (594 aa)
C3ZE81_BRAFLUncharacterized protein. (517 aa)
C3ZD95_BRAFLUncharacterized protein. (499 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
C3ZBQ9_BRAFLHelicase ATP-binding domain-containing protein. (270 aa)
C3ZBB4_BRAFLUncharacterized protein. (121 aa)
C3ZAS8_BRAFLUncharacterized protein. (1098 aa)
C3ZAS6_BRAFLHelicase C-terminal domain-containing protein. (606 aa)
C3Z899_BRAFLAAA domain-containing protein. (364 aa)
C3Z883_BRAFLHistone H2B; Belongs to the histone H2B family. (283 aa)
C3Z879_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3Z7P4_BRAFLDNA ligase. (952 aa)
C3Z7J9_BRAFLUncharacterized protein. (557 aa)
C3Z7G6_BRAFLUncharacterized protein. (203 aa)
C3Z7F0_BRAFLHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (220 aa)
C3Z7D4_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3Z7D0_BRAFLHistone domain-containing protein; Belongs to the histone H2B family. (122 aa)
C3Z7B0_BRAFLHistone H2B; Belongs to the histone H2B family. (118 aa)
C3Z7A1_BRAFLHistone H2B; Belongs to the histone H2B family. (98 aa)
C3Z795_BRAFLHistone H2B; Belongs to the histone H2B family. (110 aa)
C3Z789_BRAFLHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
C3Z787_BRAFLHistone H2B; Belongs to the histone H2B family. (121 aa)
C3Z775_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3Z773_BRAFLHistone H2B; Belongs to the histone H2B family. (121 aa)
C3Z766_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3Z762_BRAFLHistone H2B; Belongs to the histone H2B family. (120 aa)
C3Z6I4_BRAFLUncharacterized protein. (107 aa)
C3Z5X3_BRAFLH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (216 aa)
C3Z3N5_BRAFLSpc7 domain-containing protein. (1713 aa)
C3Z296_BRAFLMyb-like domain-containing protein. (1248 aa)
C3Z1Z1_BRAFL3'-5' exonuclease domain-containing protein. (505 aa)
C3YZV0_BRAFLCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (320 aa)
C3YZR1_BRAFLUncharacterized protein. (490 aa)
C3YZR0_BRAFLPHD-type domain-containing protein. (69 aa)
C3YZM5_BRAFLUncharacterized protein. (453 aa)
C3YXD2_BRAFLMis18 domain-containing protein. (303 aa)
C3YXB5_BRAFLUncharacterized protein. (368 aa)
C3YWC7_BRAFLHistone H2B; Belongs to the histone H2B family. (122 aa)
C3YVZ4_BRAFLHistone domain-containing protein; Belongs to the histone H2B family. (151 aa)
C3YV14_BRAFLHelicase C-terminal domain-containing protein. (503 aa)
C3YV12_BRAFLHelicase C-terminal domain-containing protein. (807 aa)
C3YV10_BRAFLUncharacterized protein. (133 aa)
C3YV08_BRAFLUncharacterized protein. (196 aa)
C3YV06_BRAFLCCHC-type domain-containing protein. (999 aa)
C3YUN6_BRAFLUncharacterized protein. (118 aa)
C3YTH1_BRAFLUncharacterized protein. (82 aa)
C3YQ31_BRAFLDNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (474 aa)
C3YNS7_BRAFLUncharacterized protein. (277 aa)
C3YMK5_BRAFLHelicase ATP-binding domain-containing protein. (296 aa)
C3YLP2_BRAFLRuvB-like helicase; Belongs to the RuvB family. (456 aa)
C3YKR1_BRAFLATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (666 aa)
C3YII8_BRAFLCENP-C_C domain-containing protein. (1118 aa)
C3YID2_BRAFLWD_REPEATS_REGION domain-containing protein. (187 aa)
C3YEU3_BRAFLDNA primase; Belongs to the eukaryotic-type primase small subunit family. (372 aa)
C3YDK8_BRAFLAAA domain-containing protein. (362 aa)
C3YD16_BRAFLTelo_bind domain-containing protein. (396 aa)
C3YBV3_BRAFLANK_REP_REGION domain-containing protein. (124 aa)
C3YBV2_BRAFLANK_REP_REGION domain-containing protein. (123 aa)
C3YAB6_BRAFLCS domain-containing protein. (707 aa)
C3YAA1_BRAFLUncharacterized protein. (521 aa)
C3Y9F3_BRAFLUncharacterized protein. (449 aa)
C3Y8Y7_BRAFLHistone H2B; Belongs to the histone H2B family. (129 aa)
C3Y8N4_BRAFLHelicase C-terminal domain-containing protein. (591 aa)
C3Y6A4_BRAFLRuvB-like helicase; Belongs to the RuvB family. (468 aa)
C3Y5K6_BRAFLDNA polymerase. (1286 aa)
C3Y522_BRAFLUncharacterized protein. (1220 aa)
C3Y4Y4_BRAFLUncharacterized protein. (223 aa)
C3Y4Y3_BRAFLBRCT domain-containing protein. (756 aa)
C3Y4R4_BRAFLHelicase C-terminal domain-containing protein. (392 aa)
C3Y462_BRAFLRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (159 aa)
C3Y221_BRAFLUncharacterized protein. (313 aa)
C3Y1W8_BRAFLUncharacterized protein. (720 aa)
C3Y1F4_BRAFLUncharacterized protein. (288 aa)
C3XZY0_BRAFLHistone H2A; Belongs to the histone H2A family. (128 aa)
C3XXK6_BRAFLAAA domain-containing protein. (356 aa)
C3XVA8_BRAFLUncharacterized protein. (115 aa)
C3XU84_BRAFLUncharacterized protein. (355 aa)
C3XTW9_BRAFLUncharacterized protein. (64 aa)
C3XTH2_BRAFLHistone H2B; Belongs to the histone H2B family. (131 aa)
C3XT78_BRAFLUncharacterized protein. (458 aa)
C3XQS8_BRAFLHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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