(11 nodes) Ketone body metabolism network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XTE6_BRAFL	Uncharacterized protein. (247 aa)
	C3XTR5_BRAFL	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (346 aa)
	C3XTR6_BRAFL	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (345 aa)
	C3YIJ1_BRAFL	Uncharacterized protein. (291 aa)
	C3YIJ2_BRAFL	Uncharacterized protein. (288 aa)
	C3YQF4_BRAFL	Pyruvate carboxyltransferase domain-containing protein. (313 aa)
	C3YUR9_BRAFL	Uncharacterized protein. (241 aa)
	C3Z8S5_BRAFL	Uncharacterized protein. (637 aa)
	C3ZK55_BRAFL	Uncharacterized protein. (414 aa)
	C3ZK58_BRAFL	AMP-binding_C domain-containing protein. (119 aa)
	C3ZKL6_BRAFL	AMP-binding domain-containing protein. (305 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XTE6_BRAFL	C3XTR5_BRAFL	C3XTE6	C3XTR5	Uncharacterized protein.	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.696
C3XTE6_BRAFL	C3YIJ1_BRAFL	C3XTE6	C3YIJ1	Uncharacterized protein.	Uncharacterized protein.	0.927
C3XTE6_BRAFL	C3YQF4_BRAFL	C3XTE6	C3YQF4	Uncharacterized protein.	Pyruvate carboxyltransferase domain-containing protein.	0.932
C3XTE6_BRAFL	C3Z8S5_BRAFL	C3XTE6	C3Z8S5	Uncharacterized protein.	Uncharacterized protein.	0.918
C3XTR5_BRAFL	C3XTE6_BRAFL	C3XTR5	C3XTE6	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.696
C3XTR5_BRAFL	C3YIJ1_BRAFL	C3XTR5	C3YIJ1	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.936
C3XTR5_BRAFL	C3YQF4_BRAFL	C3XTR5	C3YQF4	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Pyruvate carboxyltransferase domain-containing protein.	0.931
C3XTR5_BRAFL	C3Z8S5_BRAFL	C3XTR5	C3Z8S5	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.908
C3YIJ1_BRAFL	C3XTE6_BRAFL	C3YIJ1	C3XTE6	Uncharacterized protein.	Uncharacterized protein.	0.927
C3YIJ1_BRAFL	C3XTR5_BRAFL	C3YIJ1	C3XTR5	Uncharacterized protein.	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.936
C3YIJ1_BRAFL	C3YIJ2_BRAFL	C3YIJ1	C3YIJ2	Uncharacterized protein.	Uncharacterized protein.	0.951
C3YIJ1_BRAFL	C3YQF4_BRAFL	C3YIJ1	C3YQF4	Uncharacterized protein.	Pyruvate carboxyltransferase domain-containing protein.	0.964
C3YIJ1_BRAFL	C3Z8S5_BRAFL	C3YIJ1	C3Z8S5	Uncharacterized protein.	Uncharacterized protein.	0.918
C3YIJ2_BRAFL	C3YIJ1_BRAFL	C3YIJ2	C3YIJ1	Uncharacterized protein.	Uncharacterized protein.	0.951
C3YIJ2_BRAFL	C3YQF4_BRAFL	C3YIJ2	C3YQF4	Uncharacterized protein.	Pyruvate carboxyltransferase domain-containing protein.	0.655
C3YQF4_BRAFL	C3XTE6_BRAFL	C3YQF4	C3XTE6	Pyruvate carboxyltransferase domain-containing protein.	Uncharacterized protein.	0.932
C3YQF4_BRAFL	C3XTR5_BRAFL	C3YQF4	C3XTR5	Pyruvate carboxyltransferase domain-containing protein.	3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.931
C3YQF4_BRAFL	C3YIJ1_BRAFL	C3YQF4	C3YIJ1	Pyruvate carboxyltransferase domain-containing protein.	Uncharacterized protein.	0.964
C3YQF4_BRAFL	C3YIJ2_BRAFL	C3YQF4	C3YIJ2	Pyruvate carboxyltransferase domain-containing protein.	Uncharacterized protein.	0.655
C3YQF4_BRAFL	C3Z8S5_BRAFL	C3YQF4	C3Z8S5	Pyruvate carboxyltransferase domain-containing protein.	Uncharacterized protein.	0.962