(10 nodes) Receptor Mediated Mitophagy network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZJI8_BRAFL	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (86 aa)
	C3XU59_BRAFL	Uncharacterized protein. (120 aa)
	C3Z475_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (268 aa)
	C3ZBE3_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (367 aa)
	C3ZDP9_BRAFL	Uncharacterized protein. (147 aa)
	C3ZE89_BRAFL	Uncharacterized protein. (916 aa)
	C3ZE91_BRAFL	Uncharacterized protein. (232 aa)
	C3ZHT2_BRAFL	Uncharacterized protein. (281 aa)
	C3ZHY7_BRAFL	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (227 aa)
	C3ZNT2_BRAFL	Autophagy protein 5; Involved in autophagic vesicle formation. (261 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XU59_BRAFL	C3Z475_BRAFL	C3XU59	C3Z475	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.874
C3XU59_BRAFL	C3ZDP9_BRAFL	C3XU59	C3ZDP9	Uncharacterized protein.	Uncharacterized protein.	0.905
C3XU59_BRAFL	C3ZJI8_BRAFL	C3XU59	C3ZJI8	Uncharacterized protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.884
C3XU59_BRAFL	C3ZNT2_BRAFL	C3XU59	C3ZNT2	Uncharacterized protein.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.880
C3Z475_BRAFL	C3XU59_BRAFL	C3Z475	C3XU59	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.874
C3Z475_BRAFL	C3ZDP9_BRAFL	C3Z475	C3ZDP9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.759
C3Z475_BRAFL	C3ZJI8_BRAFL	C3Z475	C3ZJI8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.986
C3Z475_BRAFL	C3ZNT2_BRAFL	C3Z475	C3ZNT2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.985
C3ZBE3_BRAFL	C3ZDP9_BRAFL	C3ZBE3	C3ZDP9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.710
C3ZBE3_BRAFL	C3ZHY7_BRAFL	C3ZBE3	C3ZHY7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.999
C3ZDP9_BRAFL	C3XU59_BRAFL	C3ZDP9	C3XU59	Uncharacterized protein.	Uncharacterized protein.	0.905
C3ZDP9_BRAFL	C3Z475_BRAFL	C3ZDP9	C3Z475	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.759
C3ZDP9_BRAFL	C3ZBE3_BRAFL	C3ZDP9	C3ZBE3	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.710
C3ZDP9_BRAFL	C3ZHT2_BRAFL	C3ZDP9	C3ZHT2	Uncharacterized protein.	Uncharacterized protein.	0.986
C3ZDP9_BRAFL	C3ZHY7_BRAFL	C3ZDP9	C3ZHY7	Uncharacterized protein.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.687
C3ZDP9_BRAFL	C3ZJI8_BRAFL	C3ZDP9	C3ZJI8	Uncharacterized protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.740
C3ZDP9_BRAFL	C3ZNT2_BRAFL	C3ZDP9	C3ZNT2	Uncharacterized protein.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.735
C3ZHT2_BRAFL	C3ZDP9_BRAFL	C3ZHT2	C3ZDP9	Uncharacterized protein.	Uncharacterized protein.	0.986
C3ZHY7_BRAFL	C3ZBE3_BRAFL	C3ZHY7	C3ZBE3	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.999
C3ZHY7_BRAFL	C3ZDP9_BRAFL	C3ZHY7	C3ZDP9	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Uncharacterized protein.	0.687