(54 nodes) CDC42 GTPase cycle network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Z288_BRAFL	Uncharacterized protein. (493 aa)
	C3Z851_BRAFL	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (135 aa)
	C3ZB87_BRAFL	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (138 aa)
	C3ZB88_BRAFL	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (138 aa)
	C3ZBH1_BRAFL	Uncharacterized protein. (352 aa)
	C3ZBH2_BRAFL	Uncharacterized protein. (186 aa)
	C3ZET8_BRAFL	Uncharacterized protein. (1306 aa)
	C3Y0Q1_BRAFL	Uncharacterized protein. (271 aa)
	C3ZF31_BRAFL	Uncharacterized protein; Belongs to the DOCK family. (1617 aa)
	C3ZF33_BRAFL	DHR-2 domain-containing protein; Belongs to the DOCK family. (649 aa)
	C3ZFQ8_BRAFL	Uncharacterized protein. (1301 aa)
	C3ZH14_BRAFL	Uncharacterized protein. (1202 aa)
	C3ZH15_BRAFL	Uncharacterized protein. (259 aa)
	C3ZIB9_BRAFL	Uncharacterized protein. (191 aa)
	C3ZIC4_BRAFL	Rho-GAP domain-containing protein. (771 aa)
	C3ZNT6_BRAFL	Uncharacterized protein. (1425 aa)
	C3ZQX4_BRAFL	Uncharacterized protein. (1993 aa)
	C3ZTK9_BRAFL	Uncharacterized protein. (659 aa)
	C3Y4B1_BRAFL	Uncharacterized protein; Belongs to the synaptobrevin family. (198 aa)
	C3ZWI3_BRAFL	Uncharacterized protein. (1034 aa)
	C3ZZQ1_BRAFL	Uncharacterized protein. (128 aa)
	C3ZZQ2_BRAFL	Uncharacterized protein. (348 aa)
	C3Y4C7_BRAFL	Uncharacterized protein. (1023 aa)
	C3Y9Z2_BRAFL	DHR-2 domain-containing protein; Belongs to the DOCK family. (653 aa)
	C3Y9Z3_BRAFL	DHR-1 domain-containing protein; Belongs to the DOCK family. (1405 aa)
	C3YAC0_BRAFL	Uncharacterized protein. (328 aa)
	C3YAC1_BRAFL	DH domain-containing protein. (133 aa)
	C3YAC5_BRAFL	Uncharacterized protein. (394 aa)
	C3YAM8_BRAFL	Uncharacterized protein. (519 aa)
	C3YBK1_BRAFL	Uncharacterized protein. (853 aa)
	C3YBK2_BRAFL	Uncharacterized protein. (571 aa)
	C3YGE1_BRAFL	Uncharacterized protein. (1281 aa)
	C3YH07_BRAFL	FH2 domain-containing protein. (393 aa)
	C3YJI7_BRAFL	Uncharacterized protein. (923 aa)
	C3YM03_BRAFL	PDZ domain-containing protein. (657 aa)
	C3YP16_BRAFL	Uncharacterized protein. (460 aa)
	C3YUH6_BRAFL	DH domain-containing protein. (269 aa)
	C3YXF3_BRAFL	Uncharacterized protein. (132 aa)
	C3YXF4_BRAFL	CRAL-TRIO domain-containing protein. (344 aa)
	C3YZ78_BRAFL	Uncharacterized protein. (926 aa)
	C3YZP2_BRAFL	Uncharacterized protein. (807 aa)
	C3Z1L0_BRAFL	Uncharacterized protein. (1248 aa)
	C3Z1L2_BRAFL	Uncharacterized protein. (1225 aa)
	Msx1	BTB domain-containing protein. (631 aa)
	C3Z2I7_BRAFL	Uncharacterized protein. (1033 aa)
	C3Z2W1_BRAFL	Uncharacterized protein. (1142 aa)
	C3Z6E2_BRAFL	Uncharacterized protein. (1162 aa)
	C3Z6J7_BRAFL	Rho-GAP domain-containing protein. (127 aa)
	C3Z6J8_BRAFL	Uncharacterized protein. (59 aa)
	C3XPD5_BRAFL	Uncharacterized protein. (1150 aa)
	C3XSV1_BRAFL	DH domain-containing protein. (269 aa)
	C3XT97_BRAFL	WASH_WAHD domain-containing protein. (297 aa)
	C3XWH2_BRAFL	Uncharacterized protein. (1247 aa)
	C3XYW8_BRAFL	Rho-GAP domain-containing protein. (60 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XT97_BRAFL	C3YGE1_BRAFL	C3XT97	C3YGE1	WASH_WAHD domain-containing protein.	Uncharacterized protein.	0.482
C3XT97_BRAFL	C3YH07_BRAFL	C3XT97	C3YH07	WASH_WAHD domain-containing protein.	FH2 domain-containing protein.	0.482
C3XWH2_BRAFL	C3ZIB9_BRAFL	C3XWH2	C3ZIB9	Uncharacterized protein.	Uncharacterized protein.	0.562
C3Y0Q1_BRAFL	C3ZIB9_BRAFL	C3Y0Q1	C3ZIB9	Uncharacterized protein.	Uncharacterized protein.	0.481
C3Y4B1_BRAFL	C3ZIB9_BRAFL	C3Y4B1	C3ZIB9	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.628
C3Y4C7_BRAFL	C3YJI7_BRAFL	C3Y4C7	C3YJI7	Uncharacterized protein.	Uncharacterized protein.	0.976
C3Y4C7_BRAFL	C3ZIB9_BRAFL	C3Y4C7	C3ZIB9	Uncharacterized protein.	Uncharacterized protein.	0.932
C3Y9Z2_BRAFL	C3Y9Z3_BRAFL	C3Y9Z2	C3Y9Z3	DHR-2 domain-containing protein; Belongs to the DOCK family.	DHR-1 domain-containing protein; Belongs to the DOCK family.	0.940
C3Y9Z2_BRAFL	C3ZF31_BRAFL	C3Y9Z2	C3ZF31	DHR-2 domain-containing protein; Belongs to the DOCK family.	Uncharacterized protein; Belongs to the DOCK family.	0.720
C3Y9Z2_BRAFL	C3ZIB9_BRAFL	C3Y9Z2	C3ZIB9	DHR-2 domain-containing protein; Belongs to the DOCK family.	Uncharacterized protein.	0.775
C3Y9Z3_BRAFL	C3Y9Z2_BRAFL	C3Y9Z3	C3Y9Z2	DHR-1 domain-containing protein; Belongs to the DOCK family.	DHR-2 domain-containing protein; Belongs to the DOCK family.	0.940
C3Y9Z3_BRAFL	C3ZF33_BRAFL	C3Y9Z3	C3ZF33	DHR-1 domain-containing protein; Belongs to the DOCK family.	DHR-2 domain-containing protein; Belongs to the DOCK family.	0.903
C3Y9Z3_BRAFL	C3ZIB9_BRAFL	C3Y9Z3	C3ZIB9	DHR-1 domain-containing protein; Belongs to the DOCK family.	Uncharacterized protein.	0.775
C3YAM8_BRAFL	C3ZIB9_BRAFL	C3YAM8	C3ZIB9	Uncharacterized protein.	Uncharacterized protein.	0.561
C3YBK1_BRAFL	C3YBK2_BRAFL	C3YBK1	C3YBK2	Uncharacterized protein.	Uncharacterized protein.	0.924
C3YBK1_BRAFL	C3ZIB9_BRAFL	C3YBK1	C3ZIB9	Uncharacterized protein.	Uncharacterized protein.	0.696
C3YBK2_BRAFL	C3YBK1_BRAFL	C3YBK2	C3YBK1	Uncharacterized protein.	Uncharacterized protein.	0.924
C3YBK2_BRAFL	C3ZIB9_BRAFL	C3YBK2	C3ZIB9	Uncharacterized protein.	Uncharacterized protein.	0.696
C3YGE1_BRAFL	C3XT97_BRAFL	C3YGE1	C3XT97	Uncharacterized protein.	WASH_WAHD domain-containing protein.	0.482
C3YGE1_BRAFL	C3Z6E2_BRAFL	C3YGE1	C3Z6E2	Uncharacterized protein.	Uncharacterized protein.	0.405