(8 nodes) Hsp70 protein network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQW1_BRAFL	Uncharacterized protein. (582 aa)
	C3XQW2_BRAFL	Uncharacterized protein. (538 aa)
	C3XQX9_BRAFL	Uncharacterized protein. (585 aa)
	C3XQY1_BRAFL	Uncharacterized protein. (574 aa)
	C3XQY2_BRAFL	Uncharacterized protein. (587 aa)
	C3Y0V0_BRAFL	Uncharacterized protein. (993 aa)
	C3YRQ7_BRAFL	Uncharacterized protein. (240 aa)
	C3ZQ99_BRAFL	Uncharacterized protein; Belongs to the heat shock protein 70 family. (773 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQW1_BRAFL	C3YRQ7_BRAFL	C3XQW1	C3YRQ7	Uncharacterized protein.	Uncharacterized protein.	0.449
C3XQW2_BRAFL	C3YRQ7_BRAFL	C3XQW2	C3YRQ7	Uncharacterized protein.	Uncharacterized protein.	0.449
C3XQX9_BRAFL	C3YRQ7_BRAFL	C3XQX9	C3YRQ7	Uncharacterized protein.	Uncharacterized protein.	0.449
C3XQY1_BRAFL	C3YRQ7_BRAFL	C3XQY1	C3YRQ7	Uncharacterized protein.	Uncharacterized protein.	0.449
C3XQY2_BRAFL	C3YRQ7_BRAFL	C3XQY2	C3YRQ7	Uncharacterized protein.	Uncharacterized protein.	0.449
C3YRQ7_BRAFL	C3XQW1_BRAFL	C3YRQ7	C3XQW1	Uncharacterized protein.	Uncharacterized protein.	0.449
C3YRQ7_BRAFL	C3XQW2_BRAFL	C3YRQ7	C3XQW2	Uncharacterized protein.	Uncharacterized protein.	0.449
C3YRQ7_BRAFL	C3XQX9_BRAFL	C3YRQ7	C3XQX9	Uncharacterized protein.	Uncharacterized protein.	0.449
C3YRQ7_BRAFL	C3XQY1_BRAFL	C3YRQ7	C3XQY1	Uncharacterized protein.	Uncharacterized protein.	0.449
C3YRQ7_BRAFL	C3XQY2_BRAFL	C3YRQ7	C3XQY2	Uncharacterized protein.	Uncharacterized protein.	0.449
C3YRQ7_BRAFL	C3ZQ99_BRAFL	C3YRQ7	C3ZQ99	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.489
C3ZQ99_BRAFL	C3YRQ7_BRAFL	C3ZQ99	C3YRQ7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.489