(23 nodes) FAD dependent oxidoreductase network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y1M9_BRAFL	Uncharacterized protein. (828 aa)
	C3XSN5_BRAFL	DAO domain-containing protein. (341 aa)
	C3Y3B8_BRAFL	DAO domain-containing protein. (342 aa)
	C3YCA7_BRAFL	Amine oxidase. (440 aa)
	C3YDB6_BRAFL	DAO domain-containing protein. (234 aa)
	C3YDB7_BRAFL	DAO domain-containing protein. (394 aa)
	C3YNP8_BRAFL	DAO domain-containing protein. (800 aa)
	C3YNP9_BRAFL	DAO domain-containing protein. (416 aa)
	C3YTP2_BRAFL	DAO domain-containing protein. (388 aa)
	C3Z4N0_BRAFL	Uncharacterized protein. (245 aa)
	C3Z573_BRAFL	DAO domain-containing protein. (432 aa)
	C3Y2W5_BRAFL	DAO domain-containing protein. (320 aa)
	C3Z9E1_BRAFL	Uncharacterized protein. (878 aa)
	C3ZB43_BRAFL	DAO domain-containing protein. (345 aa)
	C3ZLH8_BRAFL	Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. (804 aa)
	C3ZP77_BRAFL	DAO domain-containing protein. (154 aa)
	C3ZZU7_BRAFL	Uncharacterized protein. (321 aa)
	C3Y1N1_BRAFL	Uncharacterized protein. (874 aa)
	C3Y1N0_BRAFL	Uncharacterized protein. (774 aa)
	BdhA	S1-like domain-containing protein. (876 aa)
	C3XU72_BRAFL	Uncharacterized protein. (822 aa)
	C3XVP5_BRAFL	DAO domain-containing protein. (387 aa)
	C3XY02_BRAFL	DAO domain-containing protein. (326 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BdhA	C3XU72_BRAFL	C3XTR3	C3XU72	S1-like domain-containing protein.	Uncharacterized protein.	0.435
BdhA	C3XVP5_BRAFL	C3XTR3	C3XVP5	S1-like domain-containing protein.	DAO domain-containing protein.	0.906
BdhA	C3Y1M9_BRAFL	C3XTR3	C3Y1M9	S1-like domain-containing protein.	Uncharacterized protein.	0.435
BdhA	C3Y1N0_BRAFL	C3XTR3	C3Y1N0	S1-like domain-containing protein.	Uncharacterized protein.	0.435
BdhA	C3Y1N1_BRAFL	C3XTR3	C3Y1N1	S1-like domain-containing protein.	Uncharacterized protein.	0.435
BdhA	C3YDB6_BRAFL	C3XTR3	C3YDB6	S1-like domain-containing protein.	DAO domain-containing protein.	0.906
BdhA	C3Z9E1_BRAFL	C3XTR3	C3Z9E1	S1-like domain-containing protein.	Uncharacterized protein.	0.435
C3XSN5_BRAFL	C3XU72_BRAFL	C3XSN5	C3XU72	DAO domain-containing protein.	Uncharacterized protein.	0.435
C3XSN5_BRAFL	C3XVP5_BRAFL	C3XSN5	C3XVP5	DAO domain-containing protein.	DAO domain-containing protein.	0.906
C3XSN5_BRAFL	C3Y1M9_BRAFL	C3XSN5	C3Y1M9	DAO domain-containing protein.	Uncharacterized protein.	0.435
C3XSN5_BRAFL	C3Y1N0_BRAFL	C3XSN5	C3Y1N0	DAO domain-containing protein.	Uncharacterized protein.	0.435
C3XSN5_BRAFL	C3Y1N1_BRAFL	C3XSN5	C3Y1N1	DAO domain-containing protein.	Uncharacterized protein.	0.435
C3XSN5_BRAFL	C3YDB6_BRAFL	C3XSN5	C3YDB6	DAO domain-containing protein.	DAO domain-containing protein.	0.906
C3XSN5_BRAFL	C3Z9E1_BRAFL	C3XSN5	C3Z9E1	DAO domain-containing protein.	Uncharacterized protein.	0.435
C3XU72_BRAFL	BdhA	C3XU72	C3XTR3	Uncharacterized protein.	S1-like domain-containing protein.	0.435
C3XU72_BRAFL	C3XSN5_BRAFL	C3XU72	C3XSN5	Uncharacterized protein.	DAO domain-containing protein.	0.435
C3XU72_BRAFL	C3XVP5_BRAFL	C3XU72	C3XVP5	Uncharacterized protein.	DAO domain-containing protein.	0.461
C3XU72_BRAFL	C3XY02_BRAFL	C3XU72	C3XY02	Uncharacterized protein.	DAO domain-containing protein.	0.435
C3XU72_BRAFL	C3Y2W5_BRAFL	C3XU72	C3Y2W5	Uncharacterized protein.	DAO domain-containing protein.	0.435
C3XU72_BRAFL	C3Y3B8_BRAFL	C3XU72	C3Y3B8	Uncharacterized protein.	DAO domain-containing protein.	0.435