(30 nodes) SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XR86_BRAFL	Uncharacterized protein. (313 aa)
	C3XVK0_BRAFL	SET domain-containing protein. (131 aa)
	C3XW52_BRAFL	Uncharacterized protein. (734 aa)
	C3XYM4_BRAFL	Uncharacterized protein. (1721 aa)
	C3XYU8_BRAFL	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (1480 aa)
	C3Y206_BRAFL	Uncharacterized protein. (561 aa)
	C3Y276_BRAFL	Uncharacterized protein. (902 aa)
	C3Y414_BRAFL	SET domain-containing protein. (302 aa)
	C3Y4M5_BRAFL	SET domain-containing protein. (363 aa)
	C3Y547_BRAFL	SET domain-containing protein. (312 aa)
	C3Y5H5_BRAFL	Uncharacterized protein. (1490 aa)
	C3Y778_BRAFL	Uncharacterized protein. (1722 aa)
	C3YCV5_BRAFL	SET domain-containing protein. (85 aa)
	C3YIC9_BRAFL	Uncharacterized protein. (748 aa)
	C3YJ84_BRAFL	Uncharacterized protein. (1608 aa)
	C3YKU4_BRAFL	Uncharacterized protein. (801 aa)
	C3YV86_BRAFL	Uncharacterized protein. (269 aa)
	C3Z283_BRAFL	Uncharacterized protein. (573 aa)
	C3Z8X3_BRAFL	Uncharacterized protein. (1541 aa)
	C3Z9H1_BRAFL	Uncharacterized protein. (463 aa)
	C3ZBS2_BRAFL	Uncharacterized protein. (400 aa)
	C3ZEA3_BRAFL	SET domain-containing protein. (390 aa)
	C3ZH30_BRAFL	Uncharacterized protein. (1891 aa)
	C3ZKJ1_BRAFL	Uncharacterized protein. (718 aa)
	C3ZL20_BRAFL	Uncharacterized protein. (2482 aa)
	C3ZNA6_BRAFL	Uncharacterized protein. (294 aa)
	C3ZQK1_BRAFL	Uncharacterized protein. (778 aa)
	C3ZQQ3_BRAFL	Uncharacterized protein. (909 aa)
	C3ZW43_BRAFL	SET domain-containing protein. (256 aa)
	C4A0M0_BRAFL	SET domain-containing protein. (202 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XR86_BRAFL	C3XW52_BRAFL	C3XR86	C3XW52	Uncharacterized protein.	Uncharacterized protein.	0.455
C3XR86_BRAFL	C3Y276_BRAFL	C3XR86	C3Y276	Uncharacterized protein.	Uncharacterized protein.	0.455
C3XR86_BRAFL	C3ZH30_BRAFL	C3XR86	C3ZH30	Uncharacterized protein.	Uncharacterized protein.	0.627
C3XR86_BRAFL	C3ZL20_BRAFL	C3XR86	C3ZL20	Uncharacterized protein.	Uncharacterized protein.	0.640
C3XVK0_BRAFL	C3Y4M5_BRAFL	C3XVK0	C3Y4M5	SET domain-containing protein.	SET domain-containing protein.	0.493
C3XVK0_BRAFL	C3Y547_BRAFL	C3XVK0	C3Y547	SET domain-containing protein.	SET domain-containing protein.	0.684
C3XW52_BRAFL	C3XR86_BRAFL	C3XW52	C3XR86	Uncharacterized protein.	Uncharacterized protein.	0.455
C3XW52_BRAFL	C3Z8X3_BRAFL	C3XW52	C3Z8X3	Uncharacterized protein.	Uncharacterized protein.	0.433
C3XW52_BRAFL	C3ZH30_BRAFL	C3XW52	C3ZH30	Uncharacterized protein.	Uncharacterized protein.	0.447
C3XYM4_BRAFL	C3Z8X3_BRAFL	C3XYM4	C3Z8X3	Uncharacterized protein.	Uncharacterized protein.	0.525
C3Y206_BRAFL	C3ZNA6_BRAFL	C3Y206	C3ZNA6	Uncharacterized protein.	Uncharacterized protein.	0.472
C3Y276_BRAFL	C3XR86_BRAFL	C3Y276	C3XR86	Uncharacterized protein.	Uncharacterized protein.	0.455
C3Y276_BRAFL	C3Z8X3_BRAFL	C3Y276	C3Z8X3	Uncharacterized protein.	Uncharacterized protein.	0.433
C3Y276_BRAFL	C3ZH30_BRAFL	C3Y276	C3ZH30	Uncharacterized protein.	Uncharacterized protein.	0.447
C3Y414_BRAFL	C3Z9H1_BRAFL	C3Y414	C3Z9H1	SET domain-containing protein.	Uncharacterized protein.	0.527
C3Y414_BRAFL	C3ZL20_BRAFL	C3Y414	C3ZL20	SET domain-containing protein.	Uncharacterized protein.	0.447
C3Y414_BRAFL	C3ZQQ3_BRAFL	C3Y414	C3ZQQ3	SET domain-containing protein.	Uncharacterized protein.	0.444
C3Y4M5_BRAFL	C3XVK0_BRAFL	C3Y4M5	C3XVK0	SET domain-containing protein.	SET domain-containing protein.	0.493
C3Y4M5_BRAFL	C3Z8X3_BRAFL	C3Y4M5	C3Z8X3	SET domain-containing protein.	Uncharacterized protein.	0.458
C3Y4M5_BRAFL	C3ZH30_BRAFL	C3Y4M5	C3ZH30	SET domain-containing protein.	Uncharacterized protein.	0.466