(14 nodes) Arginine biosynthesis network (Branchiostoma floridae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	C3XQA6_BRAFL	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (507 aa)
	C3XV03_BRAFL	Uncharacterized protein. (464 aa)
	C3Y2R0_BRAFL	Uncharacterized protein. (383 aa)
	C3Y524_BRAFL	Nitric oxide synthase; Produces nitric oxide (NO). (1329 aa)
	NosC	Uncharacterized protein. (1441 aa)
	C3YIV5_BRAFL	Aminotran_1_2 domain-containing protein. (412 aa)
	C3Z4T8_BRAFL	Arginase. (347 aa)
	C3Z6N9_BRAFL	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (361 aa)
	C3Z840_BRAFL	Glutamine synthetase. (372 aa)
	C3Z841_BRAFL	Glutamine synthetase. (370 aa)
	C3ZAP0_BRAFL	M20_dimer domain-containing protein. (411 aa)
	C3ZFA4_BRAFL	ANK_REP_REGION domain-containing protein. (467 aa)
	C3ZHU4_BRAFL	Urease domain-containing protein. (382 aa)
	C3ZZL9_BRAFL	Aspartate aminotransferase. (387 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQA6_BRAFL	C3Y2R0_BRAFL	C3XQA6	C3Y2R0	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Uncharacterized protein.	0.446
C3XQA6_BRAFL	C3YIV5_BRAFL	C3XQA6	C3YIV5	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Aminotran_1_2 domain-containing protein.	0.948
C3XQA6_BRAFL	C3Z840_BRAFL	C3XQA6	C3Z840	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamine synthetase.	0.954
C3XQA6_BRAFL	C3Z841_BRAFL	C3XQA6	C3Z841	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamine synthetase.	0.954
C3XQA6_BRAFL	C3ZFA4_BRAFL	C3XQA6	C3ZFA4	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	ANK_REP_REGION domain-containing protein.	0.962
C3XQA6_BRAFL	C3ZZL9_BRAFL	C3XQA6	C3ZZL9	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Aspartate aminotransferase.	0.953
C3XV03_BRAFL	C3Y2R0_BRAFL	C3XV03	C3Y2R0	Uncharacterized protein.	Uncharacterized protein.	0.999
C3XV03_BRAFL	C3Y524_BRAFL	C3XV03	C3Y524	Uncharacterized protein.	Nitric oxide synthase; Produces nitric oxide (NO).	0.942
C3XV03_BRAFL	C3Z4T8_BRAFL	C3XV03	C3Z4T8	Uncharacterized protein.	Arginase.	0.990
C3XV03_BRAFL	C3Z6N9_BRAFL	C3XV03	C3Z6N9	Uncharacterized protein.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.917
C3XV03_BRAFL	C3Z840_BRAFL	C3XV03	C3Z840	Uncharacterized protein.	Glutamine synthetase.	0.503
C3XV03_BRAFL	C3Z841_BRAFL	C3XV03	C3Z841	Uncharacterized protein.	Glutamine synthetase.	0.503
C3XV03_BRAFL	C3ZFA4_BRAFL	C3XV03	C3ZFA4	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.715
C3XV03_BRAFL	NosC	C3XV03	C3YCN5	Uncharacterized protein.	Uncharacterized protein.	0.942
C3Y2R0_BRAFL	C3XQA6_BRAFL	C3Y2R0	C3XQA6	Uncharacterized protein.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.446
C3Y2R0_BRAFL	C3XV03_BRAFL	C3Y2R0	C3XV03	Uncharacterized protein.	Uncharacterized protein.	0.999
C3Y2R0_BRAFL	C3Y524_BRAFL	C3Y2R0	C3Y524	Uncharacterized protein.	Nitric oxide synthase; Produces nitric oxide (NO).	0.942
C3Y2R0_BRAFL	C3YIV5_BRAFL	C3Y2R0	C3YIV5	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.944
C3Y2R0_BRAFL	C3Z4T8_BRAFL	C3Y2R0	C3Z4T8	Uncharacterized protein.	Arginase.	0.715
C3Y2R0_BRAFL	C3Z6N9_BRAFL	C3Y2R0	C3Z6N9	Uncharacterized protein.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.998