(4 nodes) Phenylalanine, tyrosine and tryptophan biosynthesis network (Branchiostoma floridae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YIV5_BRAFL	Aminotran_1_2 domain-containing protein. (412 aa)
	C3ZBR3_BRAFL	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. (436 aa)
	C3ZNL0_BRAFL	Uncharacterized protein. (453 aa)
	C3ZZL9_BRAFL	Aspartate aminotransferase. (387 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3YIV5_BRAFL	C3ZBR3_BRAFL	C3YIV5	C3ZBR3	Aminotran_1_2 domain-containing protein.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.963
C3YIV5_BRAFL	C3ZNL0_BRAFL	C3YIV5	C3ZNL0	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.947
C3YIV5_BRAFL	C3ZZL9_BRAFL	C3YIV5	C3ZZL9	Aminotran_1_2 domain-containing protein.	Aspartate aminotransferase.	0.980
C3ZBR3_BRAFL	C3YIV5_BRAFL	C3ZBR3	C3YIV5	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	Aminotran_1_2 domain-containing protein.	0.963
C3ZBR3_BRAFL	C3ZNL0_BRAFL	C3ZBR3	C3ZNL0	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	Uncharacterized protein.	0.942
C3ZBR3_BRAFL	C3ZZL9_BRAFL	C3ZBR3	C3ZZL9	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	Aspartate aminotransferase.	0.977
C3ZNL0_BRAFL	C3YIV5_BRAFL	C3ZNL0	C3YIV5	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.947
C3ZNL0_BRAFL	C3ZBR3_BRAFL	C3ZNL0	C3ZBR3	Uncharacterized protein.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.942
C3ZNL0_BRAFL	C3ZZL9_BRAFL	C3ZNL0	C3ZZL9	Uncharacterized protein.	Aspartate aminotransferase.	0.947
C3ZZL9_BRAFL	C3YIV5_BRAFL	C3ZZL9	C3YIV5	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.980
C3ZZL9_BRAFL	C3ZBR3_BRAFL	C3ZZL9	C3ZBR3	Aspartate aminotransferase.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.977
C3ZZL9_BRAFL	C3ZNL0_BRAFL	C3ZZL9	C3ZNL0	Aspartate aminotransferase.	Uncharacterized protein.	0.947